RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 GRM1Q13255 1194 aa17.14■□□□□ 0.34
ARHGEF28-202ENST00000296799 TEKT1Q969V4 418 aa17.14■□□□□ 0.34
ARHGEF28-202ENST00000296799 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.14■□□□□ 0.34
ARHGEF28-202ENST00000296799 DLGAP5Q15398 846 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 LEO1Q8WVC0 666 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 GTF3C6Q969F1 213 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 CCDC102AQ96A19 550 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 USP40Q9NVE5 1235 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 MACROD2A1Z1Q3 448 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 TMCO5BA8MYB1 307 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 ZNF654Q8IZM8 581 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 TCHPQ9BT92 498 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 ARPP21Q9UBL0 812 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 KCNH3Q9ULD8 1083 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 KCNJ14Q9UNX9 436 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 GBP3Q9H0R5 595 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 ZSWIM6Q9HCJ5 1215 aa17.14■□□□□ 0.33
ARHGEF28-202ENST00000296799 ZNF804BA4D1E1 1349 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 ADD1P35611 737 aaKnown RBP17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 GLI2P10070 1586 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 B4DLN1 442 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 SP4Q02446 784 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 UBE3CQ15386 1083 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 HS2ST1Q7LGA3 356 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 MAP4K1Q92918 833 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 CRACR2AQ9BSW2 395 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 DNAI2Q9GZS0 605 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 ERVV-1B6SEH8 477 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 NIM1KQ8IY84 436 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 ALS2CR12Q96Q35 445 aa17.13■□□□□ 0.33
ARHGEF28-202ENST00000296799 ZNF274Q96GC6 653 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 ZBTB21Q9ULJ3 1066 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 BRD1O95696 1058 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 KRT13P13646 458 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 TAF3Q5VWG9 929 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 TTC38Q5R3I4 469 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 USP37Q86T82 979 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 IFNKQ9P0W0 207 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 TPCN1Q9ULQ1 816 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 SPHKAPQ2M3C7 1700 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 FAM13AO94988 1023 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 PICK1Q9NRD5 415 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 VPS54Q9P1Q0 977 aa17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 PUF60Q9UHX1 559 aaKnown RBP17.12■□□□□ 0.33
ARHGEF28-202ENST00000296799 POLR2DO15514 142 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 PTGS1P23219 599 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 PLCD1P51178 756 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 ANTXR1Q9H6X2 564 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 CYLC1P35663 651 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 ARID4AP29374 1257 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 TXKP42681 527 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 MYL5Q02045 173 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 SEPT7Q16181 437 aaKnown RBP17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 LEKR1Q6ZMV7 388 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 TAX1BP1Q86VP1 789 aa17.11■□□□□ 0.33
ARHGEF28-202ENST00000296799 BICDL2A1A5D9 508 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 BACH1O14867 736 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 SASH1O94885 1247 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 SERPINB2P05120 415 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 PKD2L1Q9P0L9 805 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 KRT27Q7Z3Y8 459 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 NAP1L4Q99733 375 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 TNKSO95271 1327 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 SCNN1DP51172 638 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 ZMYM1Q5SVZ6 1142 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 ZSWIM4Q9H7M6 989 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 JADE2Q9NQC1 790 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 THRAP3Q9Y2W1 955 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 CNKSR1Q969H4 720 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 GLT8D2Q9H1C3 349 aa17.1■□□□□ 0.33
ARHGEF28-202ENST00000296799 H0YHG0 523 aa17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 CUTAO60888 179 aa17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 GTPBP4Q9BZE4 634 aaKnown RBP17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 CPSF1Q10570 1443 aaKnown RBP17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 GADD45BO75293 160 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 CYP21A2P08686 494 aa17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
ARHGEF28-202ENST00000296799 CEP135Q66GS9 1140 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms