RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CASQ2O14958 399 aaPredicted RBP18.04■□□□□ 0.48
SSRP1-202ENST00000293880 LRCH2Q5VUJ6 765 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 CCDC26Q8TAB7 109 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 KIFC2Q96AC6 838 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 BIRC3Q13489 604 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 SV2BQ7L1I2 683 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 FRMD4BQ9Y2L6 1034 aa18.04■□□□□ 0.48
SSRP1-202ENST00000293880 B4E1Z4 1266 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 EPB41P11171 864 aaKnown RBP18.03■□□□□ 0.48
SSRP1-202ENST00000293880 TNFAIP3P21580 790 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 MYL5Q02045 173 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 SETDB2Q96T68 719 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 USP26Q9BXU7 913 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 CYP26C1Q6V0L0 522 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 ZNF804AQ7Z570 1209 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 RAD51AP2Q09MP3 1159 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 CEP128Q6ZU80 1094 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 PLEKHM2Q8IWE5 1019 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 RNF168Q8IYW5 571 aaPredicted RBP18.03■□□□□ 0.48
SSRP1-202ENST00000293880 OTUD7AQ8TE49 926 aaPredicted RBP18.03■□□□□ 0.48
SSRP1-202ENST00000293880 CBX8Q9HC52 389 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 TNRQ92752 1358 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 CNGA4Q8IV77 575 aa18.03■□□□□ 0.48
SSRP1-202ENST00000293880 BLZF1Q9H2G9 400 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 CHMLP26374 656 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 SMC5Q8IY18 1101 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 RNF34Q969K3 372 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 ERO1AQ96HE7 468 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 NDUFB9Q9Y6M9 179 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 CCDC169A6NNP5 214 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 ALDH3A1P30838 453 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 MYL10Q9BUA6 226 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 INF2Q27J81 1249 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 TAB2Q9NYJ8 693 aa18.02■□□□□ 0.48
SSRP1-202ENST00000293880 POLR2DO15514 142 aaKnown RBP18.02■□□□□ 0.47
SSRP1-202ENST00000293880 ARMT1Q9H993 441 aa18.02■□□□□ 0.47
SSRP1-202ENST00000293880 GMNNO75496 209 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 MICAL1Q8TDZ2 1067 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 PARP1P09874 1014 aaKnown RBP18.01■□□□□ 0.47
SSRP1-202ENST00000293880 FANCCQ00597 558 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 CACNA2D3Q8IZS8 1091 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 HINFPQ9BQA5 517 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 BACH1O14867 736 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 MBD4O95243 580 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 CTDSPL2Q05D32 466 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 RPAINQ86UA6 219 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 CCDC110Q8TBZ0 833 aa18.01■□□□□ 0.47
SSRP1-202ENST00000293880 RPS6KB1P23443 525 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 MTX1Q13505 466 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
SSRP1-202ENST00000293880 MYO1AQ9UBC5 1043 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 HS2ST1Q7LGA3 356 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 TRMT44Q8IYL2 757 aaKnown RBP18■□□□□ 0.47
SSRP1-202ENST00000293880 MKRN1Q9UHC7 482 aaKnown RBP18■□□□□ 0.47
SSRP1-202ENST00000293880 SATB1Q01826 763 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 TTC19Q6DKK2 380 aaPredicted RBP18■□□□□ 0.47
SSRP1-202ENST00000293880 DYMQ7RTS9 669 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 HAUS7Q99871 368 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 FAM204AQ9H8W3 233 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 RABGAP1Q9Y3P9 1069 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 ASXL2Q76L83 1435 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 ZNF75DP51815 510 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 ZBTB12Q9Y330 459 aaPredicted RBP18■□□□□ 0.47
SSRP1-202ENST00000293880 GUCY2FP51841 1108 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 ITIH3Q06033 890 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 CCDC14Q49A88 953 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 DHX32Q7L7V1 743 aaKnown RBP18■□□□□ 0.47
SSRP1-202ENST00000293880 ANKRD42Q8N9B4 389 aa18■□□□□ 0.47
SSRP1-202ENST00000293880 SECISBP2LQ93073 1101 aaKnown RBP18■□□□□ 0.47
SSRP1-202ENST00000293880 SLC27A2O14975 620 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 IL15P40933 162 aaPredicted RBP17.99■□□□□ 0.47
SSRP1-202ENST00000293880 TBC1D8BQ0IIM8 1120 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 CLEC11AQ9Y240 323 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 IL16Q14005 1332 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 hCG_1642624A0A1W2PR95 340 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 NCAPH2Q6IBW4 605 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 KSR2Q6VAB6 950 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 DACT3Q96B18 629 aaPredicted RBP17.99■□□□□ 0.47
SSRP1-202ENST00000293880 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
SSRP1-202ENST00000293880 BRAPQ7Z569 592 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 ASXL1Q8IXJ9 1541 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 TXKP42681 527 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 GNAQP50148 359 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 CLUL1Q15846 466 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 ATP5DP30049 168 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 GABPAQ06546 454 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 ZYXQ15942 572 aaKnown RBP17.99■□□□□ 0.47
SSRP1-202ENST00000293880 WDR44Q5JSH3 913 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 MCUR1Q96AQ8 359 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 TRIM6Q9C030 488 aaPredicted RBP17.99■□□□□ 0.47
SSRP1-202ENST00000293880 TSPYL2Q9H2G4 693 aaPredicted RBP17.99■□□□□ 0.47
SSRP1-202ENST00000293880 NCKAP5LQ9HCH0 1330 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
SSRP1-202ENST00000293880 SORBS3O60504 671 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 B4GALNT4Q76KP1 1039 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 BAIAP2L1Q9UHR4 511 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 FNBP4Q8N3X1 1017 aaPredicted RBP17.98■□□□□ 0.47
SSRP1-202ENST00000293880 IQUBQ8NA54 791 aa17.98■□□□□ 0.47
SSRP1-202ENST00000293880 KLHDC4Q8TBB5 520 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms