RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 SNRKQ9NRH2 765 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 NOP58Q9Y2X3 529 aaKnown RBP11.76□□□□□ -0.53
HMHB1-201ENST00000289448 TRIM17Q9Y577 477 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 MYH2Q9UKX2 1941 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 SP3Q02447 781 aa11.75□□□□□ -0.53
HMHB1-201ENST00000289448 PPATQ06203 517 aa11.75□□□□□ -0.53
HMHB1-201ENST00000289448 SNAPC2Q13487 334 aa11.75□□□□□ -0.53
HMHB1-201ENST00000289448 MOGSQ13724 837 aa11.75□□□□□ -0.53
HMHB1-201ENST00000289448 NOL9Q5SY16 702 aaKnown RBP11.75□□□□□ -0.53
HMHB1-201ENST00000289448 CEP85Q6P2H3 762 aa11.75□□□□□ -0.53
HMHB1-201ENST00000289448 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.75□□□□□ -0.53
HMHB1-201ENST00000289448 TLR7Q9NYK1 1049 aaKnown RBP11.75□□□□□ -0.53
HMHB1-201ENST00000289448 KIAA0100Q14667 2235 aaKnown RBP11.74□□□□□ -0.53
HMHB1-201ENST00000289448 UQCRFS1P1P0C7P4 283 aa11.74□□□□□ -0.53
HMHB1-201ENST00000289448 MAP3K10Q02779 954 aa11.74□□□□□ -0.53
HMHB1-201ENST00000289448 OS9Q13438 667 aaPredicted RBP11.74□□□□□ -0.53
HMHB1-201ENST00000289448 PICALMQ13492 652 aa11.74□□□□□ -0.53
HMHB1-201ENST00000289448 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
HMHB1-201ENST00000289448 ERO1AQ96HE7 468 aa11.74□□□□□ -0.53
HMHB1-201ENST00000289448 ZFYVE28Q9HCC9 887 aa11.74□□□□□ -0.53
HMHB1-201ENST00000289448 RAI14Q9P0K7 980 aa11.74□□□□□ -0.53
HMHB1-201ENST00000289448 DBNLQ9UJU6 430 aaKnown RBP11.74□□□□□ -0.53
HMHB1-201ENST00000289448 KCNH4Q9UQ05 1017 aa11.74□□□□□ -0.53
HMHB1-201ENST00000289448 CYP2E1P05181 493 aaPredicted RBP11.73□□□□□ -0.53
HMHB1-201ENST00000289448 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
HMHB1-201ENST00000289448 EAF2Q96CJ1 260 aaPredicted RBP11.73□□□□□ -0.53
HMHB1-201ENST00000289448 ARHGAP39Q9C0H5 1083 aa11.73□□□□□ -0.53
HMHB1-201ENST00000289448 CCDC8Q9H0W5 538 aaPredicted RBP11.73□□□□□ -0.53
HMHB1-201ENST00000289448 EFCC1Q9HA90 598 aa11.73□□□□□ -0.53
HMHB1-201ENST00000289448 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.73□□□□□ -0.53
HMHB1-201ENST00000289448 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
HMHB1-201ENST00000289448 AK9Q5TCS8 1911 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 TLR2O60603 784 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 ZAP70P43403 619 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 GSTO1P78417 241 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 TTC39AQ5SRH9 613 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 ADGRA1Q86SQ6 560 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 SCYL3Q8IZE3 742 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 SH3RF3Q8TEJ3 882 aaPredicted RBP11.72□□□□□ -0.53
HMHB1-201ENST00000289448 ZCCHC17Q9NP64 241 aaKnown RBP11.72□□□□□ -0.53
HMHB1-201ENST00000289448 PIH1D3Q9NQM4 214 aaKnown RBP11.72□□□□□ -0.53
HMHB1-201ENST00000289448 LRP2BPQ9P2M1 347 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 EXOC6BQ9Y2D4 811 aa11.72□□□□□ -0.53
HMHB1-201ENST00000289448 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
HMHB1-201ENST00000289448 PDHXO00330 501 aa11.71□□□□□ -0.53
HMHB1-201ENST00000289448 NPM3O75607 178 aaKnown RBP11.71□□□□□ -0.53
HMHB1-201ENST00000289448 LDHCP07864 332 aa11.71□□□□□ -0.53
HMHB1-201ENST00000289448 PTPRAP18433 802 aa11.71□□□□□ -0.53
HMHB1-201ENST00000289448 CCDC158Q5M9N0 1113 aa11.71□□□□□ -0.53
HMHB1-201ENST00000289448 GPAT2Q6NUI2 795 aa11.71□□□□□ -0.53
HMHB1-201ENST00000289448 ANKRD23Q86SG2 305 aa11.71□□□□□ -0.53
HMHB1-201ENST00000289448 CCDC84Q86UT8 332 aaPredicted RBP11.71□□□□□ -0.53
HMHB1-201ENST00000289448 ZNF512BQ96KM6 892 aaPredicted RBP11.71□□□□□ -0.53
HMHB1-201ENST00000289448 ZHX2Q9Y6X8 837 aa11.71□□□□□ -0.53
HMHB1-201ENST00000289448 ADGRA2Q96PE1 1338 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 CXCL11O14625 94 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 CTGFP29279 349 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 LACTBP83111 547 aaPredicted RBP11.7□□□□□ -0.54
HMHB1-201ENST00000289448 RRP1BQ14684 758 aaKnown RBP11.7□□□□□ -0.54
HMHB1-201ENST00000289448 C17orf99Q6UX52 265 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 SIRT2Q8IXJ6 389 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 TEX11Q8IYF3 940 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 OSBPL5Q9H0X9 879 aaPredicted RBP11.7□□□□□ -0.54
HMHB1-201ENST00000289448 AATFQ9NY61 560 aaKnown RBP eCLIP11.7□□□□□ -0.54
HMHB1-201ENST00000289448 CPA4Q9UI42 421 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 AFG3L2Q9Y4W6 797 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
HMHB1-201ENST00000289448 TBC1D12O60347 775 aa11.69□□□□□ -0.54
HMHB1-201ENST00000289448 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
HMHB1-201ENST00000289448 ECM2O94769 699 aaPredicted RBP11.69□□□□□ -0.54
HMHB1-201ENST00000289448 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
HMHB1-201ENST00000289448 NAA16Q6N069 864 aaPredicted RBP11.69□□□□□ -0.54
HMHB1-201ENST00000289448 ARMC5Q96C12 935 aa11.69□□□□□ -0.54
HMHB1-201ENST00000289448 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
HMHB1-201ENST00000289448 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
HMHB1-201ENST00000289448 COG6Q9Y2V7 657 aa11.69□□□□□ -0.54
HMHB1-201ENST00000289448 PTCH2Q9Y6C5 1203 aa11.69□□□□□ -0.54
HMHB1-201ENST00000289448 DOCK2Q92608 1830 aa11.68□□□□□ -0.54
HMHB1-201ENST00000289448 A0A0G2JLL6 359 aaPredicted RBP11.68□□□□□ -0.54
HMHB1-201ENST00000289448 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
HMHB1-201ENST00000289448 CYP2C8P10632 490 aa11.68□□□□□ -0.54
HMHB1-201ENST00000289448 PPP4CP60510 307 aa11.68□□□□□ -0.54
HMHB1-201ENST00000289448 PRRT2Q7Z6L0 340 aaPredicted RBP11.68□□□□□ -0.54
HMHB1-201ENST00000289448 AACSQ86V21 672 aa11.68□□□□□ -0.54
HMHB1-201ENST00000289448 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
HMHB1-201ENST00000289448 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.68□□□□□ -0.54
HMHB1-201ENST00000289448 IL1RAPL2Q9NP60 686 aa11.68□□□□□ -0.54
HMHB1-201ENST00000289448 ZSWIM8A7E2V4 1837 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 DYNLL1P63167 89 aaKnown RBP11.67□□□□□ -0.54
HMHB1-201ENST00000289448 JAG1P78504 1218 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 MAPKAPK5Q8IW41 473 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 TGFBRAP1Q8WUH2 860 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 COL2A1P02458 1487 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms