RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SALL3Q9BXA9 1300 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 WDR33Q9C0J8 1336 aaKnown RBP11.24□□□□□ -0.61
HMGN1-201ENST00000288344 WDHD1O75717 1129 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-201ENST00000288344 PDE4AP27815 886 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 ZAP70P43403 619 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 PPP4CP60510 307 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 NFIAQ12857 509 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 AAMPQ13685 434 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 CYP4F22Q6NT55 531 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 AACSQ86V21 672 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 ZFPM1Q8IX07 1006 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 PDCD7Q8N8D1 485 aaKnown RBP11.24□□□□□ -0.61
HMGN1-201ENST00000288344 OTUD5Q96G74 571 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 PIH1D3Q9NQM4 214 aaKnown RBP11.24□□□□□ -0.61
HMGN1-201ENST00000288344 SNRKQ9NRH2 765 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 WBP1LQ9NX94 342 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 PAPPA2Q9BXP8 1791 aa11.24□□□□□ -0.61
HMGN1-201ENST00000288344 ATRNL1Q5VV63 1379 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 UNCXA6NJT0 531 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 ATP5JP18859 108 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 MAP2K2P36507 400 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 CACNB3P54284 484 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 HUNKP57058 714 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-201ENST00000288344 SPTY2D1Q68D10 685 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-201ENST00000288344 SH3BP5LQ7L8J4 393 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 ADGRA1Q86SQ6 560 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 C2orf69Q8N8R5 385 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 CAPNS2Q96L46 248 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 TMEM39BQ9GZU3 492 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 FZD1Q9UP38 647 aa11.23□□□□□ -0.61
HMGN1-201ENST00000288344 DOCK2Q92608 1830 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 UBE2Q2LH0YL09 131 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 MYO1BO43795 1136 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 SMARCA5O60264 1052 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-201ENST00000288344 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
HMGN1-201ENST00000288344 RGMBQ6NW40 437 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 ERICH6Q7L0X2 663 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 CLASRPQ8N2M8 674 aaKnown RBP11.22□□□□□ -0.61
HMGN1-201ENST00000288344 EXOC6Q8TAG9 804 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 ZNF408Q9H9D4 720 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 ABCF2Q9UG63 623 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 ABT1Q9ULW3 272 aaKnown RBP11.22□□□□□ -0.61
HMGN1-201ENST00000288344 NDUFB9Q9Y6M9 179 aa11.22□□□□□ -0.61
HMGN1-201ENST00000288344 MROH7-TTC4A0A0A0MT08 1334 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 TCP10L2B9ZVM9 353 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 AOC2O75106 756 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 IGHDP01880 384 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 SLC10A3P09131 477 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 TTC39AQ5SRH9 613 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 GORABQ5T7V8 394 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-201ENST00000288344 SMC5Q8IY18 1101 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 LRRCC1Q9C099 1032 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 DDX4Q9NQI0 724 aaKnown RBP11.21□□□□□ -0.61
HMGN1-201ENST00000288344 ZNF112Q9UJU3 913 aa11.21□□□□□ -0.61
HMGN1-201ENST00000288344 RPAP1Q9BWH6 1393 aaPredicted RBP11.21□□□□□ -0.62
HMGN1-201ENST00000288344 LAMB1P07942 1786 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 TCRBV5S4A2TA0A5A2 114 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 ENTPD3O75355 529 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 MAP4K4O95819 1239 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-201ENST00000288344 SUPT20HL1Q3ZLR7 823 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 RASAL3Q86YV0 1011 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 CSRNP1Q96S65 589 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 HAUS7Q99871 368 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 VEZTQ9HBM0 779 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
HMGN1-201ENST00000288344 PHF20L1A8MW92 1017 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 APBB1O00213 710 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 GJA5P36382 358 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 ECE1P42892 770 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 BTDP43251 543 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 CAMK2BQ13554 666 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 TNFAIP1Q13829 316 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 TMED8Q6PL24 325 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-201ENST00000288344 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
HMGN1-201ENST00000288344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.19□□□□□ -0.62
HMGN1-201ENST00000288344 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 EDC3Q96F86 508 aaKnown RBP11.19□□□□□ -0.62
HMGN1-201ENST00000288344 CLMNQ96JQ2 1002 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 CDK5RAP2Q96SN8 1893 aa11.19□□□□□ -0.62
HMGN1-201ENST00000288344 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-201ENST00000288344 DDTLA6NHG4 134 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-201ENST00000288344 LDHCP07864 332 aa11.18□□□□□ -0.62
HMGN1-201ENST00000288344 SLURP2P0DP57 97 aa11.18□□□□□ -0.62
HMGN1-201ENST00000288344 ZNF157P51786 506 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-201ENST00000288344 PI4K2BQ8TCG2 481 aa11.18□□□□□ -0.62
HMGN1-201ENST00000288344 OTUD7AQ8TE49 926 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-201ENST00000288344 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
HMGN1-201ENST00000288344 RIOK1Q9BRS2 568 aaKnown RBP11.18□□□□□ -0.62
HMGN1-201ENST00000288344 LRP2BPQ9P2M1 347 aa11.18□□□□□ -0.62
HMGN1-201ENST00000288344 ARIH1Q9Y4X5 557 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-201ENST00000288344 FOCADQ5VW36 1801 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 CHGBP05060 677 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 IFIT2P09913 472 aaKnown RBP11.17□□□□□ -0.62
HMGN1-201ENST00000288344 HSPA1AP0DMV8 641 aaKnown RBP11.17□□□□□ -0.62
HMGN1-201ENST00000288344 HSPA1BP0DMV9 641 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms