RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 GCC1Q96CN9 775 aa30.53■■■□□ 2.48
PDF-201ENST00000288022 CSRNP1Q96S65 589 aa30.53■■■□□ 2.48
PDF-201ENST00000288022 HAUS7Q99871 368 aa30.53■■■□□ 2.48
PDF-201ENST00000288022 ZNF341Q9BYN7 854 aa30.53■■■□□ 2.48
PDF-201ENST00000288022 CSADQ9Y600 493 aa30.53■■■□□ 2.48
PDF-201ENST00000288022 PPP4CP60510 307 aa30.52■■■□□ 2.48
PDF-201ENST00000288022 ANKRD45Q5TZF3 282 aa30.52■■■□□ 2.48
PDF-201ENST00000288022 SPRYD7Q5W111 196 aa30.52■■■□□ 2.48
PDF-201ENST00000288022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.52■■■□□ 2.48
PDF-201ENST00000288022 WRNIP1Q96S55 665 aa30.52■■■□□ 2.48
PDF-201ENST00000288022 RWDD1Q9H446 243 aaPredicted RBP30.52■■■□□ 2.48
PDF-201ENST00000288022 ELP3Q9H9T3 547 aa30.52■■■□□ 2.48
PDF-201ENST00000288022 CTCFP49711 727 aaPredicted RBP30.51■■■□□ 2.47
PDF-201ENST00000288022 SLC9C2Q5TAH2 1124 aa30.51■■■□□ 2.47
PDF-201ENST00000288022 TMED8Q6PL24 325 aaPredicted RBP30.51■■■□□ 2.47
PDF-201ENST00000288022 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.51■■■□□ 2.47
PDF-201ENST00000288022 MIGA1Q8NAN2 632 aa30.51■■■□□ 2.47
PDF-201ENST00000288022 NPM3O75607 178 aaKnown RBP30.5■■■□□ 2.47
PDF-201ENST00000288022 DYNLL1P63167 89 aaKnown RBP30.5■■■□□ 2.47
PDF-201ENST00000288022 VGLL4Q14135 290 aa30.5■■■□□ 2.47
PDF-201ENST00000288022 TSHZ3Q63HK5 1081 aa30.5■■■□□ 2.47
PDF-201ENST00000288022 SH3BP5LQ7L8J4 393 aa30.5■■■□□ 2.47
PDF-201ENST00000288022 REM2Q8IYK8 340 aaPredicted RBP30.5■■■□□ 2.47
PDF-201ENST00000288022 WNK4Q96J92 1243 aa30.5■■■□□ 2.47
PDF-201ENST00000288022 DDTLA6NHG4 134 aaPredicted RBP30.49■■■□□ 2.47
PDF-201ENST00000288022 PDE6AP16499 860 aa30.49■■■□□ 2.47
PDF-201ENST00000288022 PCNTO95613 3336 aa30.49■■■□□ 2.47
PDF-201ENST00000288022 CA12O43570 354 aa30.48■■■□□ 2.47
PDF-201ENST00000288022 TGFBRAP1Q8WUH2 860 aa30.48■■■□□ 2.47
PDF-201ENST00000288022 OSBPL5Q9H0X9 879 aaPredicted RBP30.48■■■□□ 2.47
PDF-201ENST00000288022 ZBTB48P10074 688 aaPredicted RBP30.47■■■□□ 2.47
PDF-201ENST00000288022 CERS3Q8IU89 383 aa30.47■■■□□ 2.47
PDF-201ENST00000288022 ZKSCAN4Q969J2 545 aaPredicted RBP30.47■■■□□ 2.47
PDF-201ENST00000288022 OPTNQ96CV9 577 aa30.47■■■□□ 2.47
PDF-201ENST00000288022 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.47■■■□□ 2.47
PDF-201ENST00000288022 TSKSQ9UJT2 592 aa30.47■■■□□ 2.47
PDF-201ENST00000288022 MAPKAPK5Q8IW41 473 aa30.46■■■□□ 2.47
PDF-201ENST00000288022 ZNF532Q9HCE3 1301 aa30.46■■■□□ 2.47
PDF-201ENST00000288022 ATRNL1Q5VV63 1379 aa30.45■■■□□ 2.47
PDF-201ENST00000288022 LBX1P52954 281 aa30.45■■■□□ 2.47
PDF-201ENST00000288022 SREBF2Q12772 1141 aa30.45■■■□□ 2.47
PDF-201ENST00000288022 OTUD7AQ8TE49 926 aaPredicted RBP30.45■■■□□ 2.47
PDF-201ENST00000288022 TTC41PQ6P2S7 1318 aa30.45■■■□□ 2.46
PDF-201ENST00000288022 MAGEB6P1A0A0J9YX57 407 aa30.44■■■□□ 2.46
PDF-201ENST00000288022 HSPA8P11142 646 aaKnown RBP30.44■■■□□ 2.46
PDF-201ENST00000288022 INPP5BP32019 993 aa30.44■■■□□ 2.46
PDF-201ENST00000288022 SNCAIPQ9Y6H5 919 aa30.44■■■□□ 2.46
PDF-201ENST00000288022 CDK5RAP2Q96SN8 1893 aa30.44■■■□□ 2.46
PDF-201ENST00000288022 FLT1P17948 1338 aa30.44■■■□□ 2.46
PDF-201ENST00000288022 COL2A1P02458 1487 aaPredicted RBP30.44■■■□□ 2.46
PDF-201ENST00000288022 MANSC4A6NHS7 340 aaPredicted RBP30.43■■■□□ 2.46
PDF-201ENST00000288022 ERC2O15083 957 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 IGHDP01880 384 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 MX1P20591 662 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 GJA5P36382 358 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 USP5P45974 858 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 CNKSR2Q8WXI2 1034 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 OTUD5Q96G74 571 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 RNF186Q9NXI6 227 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 FOCADQ5VW36 1801 aa30.43■■■□□ 2.46
PDF-201ENST00000288022 TRPA1O75762 1119 aa30.42■■■□□ 2.46
PDF-201ENST00000288022 ZNF112Q9UJU3 913 aa30.42■■■□□ 2.46
PDF-201ENST00000288022 TCRBV5S4A2TA0A5A2 114 aa30.41■■■□□ 2.46
PDF-201ENST00000288022 ADD2P35612 726 aa30.41■■■□□ 2.46
PDF-201ENST00000288022 TM4SF4P48230 202 aa30.41■■■□□ 2.46
PDF-201ENST00000288022 B4GALNT3Q6L9W6 998 aa30.41■■■□□ 2.46
PDF-201ENST00000288022 ZSCAN25Q6NSZ9 544 aa30.41■■■□□ 2.46
PDF-201ENST00000288022 ERO1BQ86YB8 467 aa30.41■■■□□ 2.46
PDF-201ENST00000288022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.41■■■□□ 2.46
PDF-201ENST00000288022 SPDYE5A6NIY4 337 aa30.4■■■□□ 2.46
PDF-201ENST00000288022 SLURP2P0DP57 97 aa30.4■■■□□ 2.46
PDF-201ENST00000288022 SMC5Q8IY18 1101 aa30.4■■■□□ 2.46
PDF-201ENST00000288022 RIOK1Q9BRS2 568 aaKnown RBP30.4■■■□□ 2.46
PDF-201ENST00000288022 DHX36Q9H2U1 1008 aaKnown RBP30.4■■■□□ 2.46
PDF-201ENST00000288022 SAGE1Q9NXZ1 904 aa30.4■■■□□ 2.46
PDF-201ENST00000288022 SAP30BPQ9UHR5 308 aaKnown RBP30.4■■■□□ 2.46
PDF-201ENST00000288022 GLRX3O76003 335 aaKnown RBP30.39■■■□□ 2.46
PDF-201ENST00000288022 MYH7P12883 1935 aa30.38■■■□□ 2.45
PDF-201ENST00000288022 FAM196BA6NMK8 535 aa30.38■■■□□ 2.45
PDF-201ENST00000288022 INHBEP58166 350 aa30.38■■■□□ 2.45
PDF-201ENST00000288022 MAP3K10Q02779 954 aa30.38■■■□□ 2.45
PDF-201ENST00000288022 SLFNL1Q499Z3 407 aa30.38■■■□□ 2.45
PDF-201ENST00000288022 CRNKL1Q9BZJ0 848 aaKnown RBP30.38■■■□□ 2.45
PDF-201ENST00000288022 LNPKQ9C0E8 428 aa30.38■■■□□ 2.45
PDF-201ENST00000288022 PRDM10Q9NQV6 1147 aa30.38■■■□□ 2.45
PDF-201ENST00000288022 PALD1Q9ULE6 856 aa30.38■■■□□ 2.45
PDF-201ENST00000288022 PHF20L1A8MW92 1017 aa30.37■■■□□ 2.45
PDF-201ENST00000288022 TBC1D12O60347 775 aa30.37■■■□□ 2.45
PDF-201ENST00000288022 COL13A1Q5TAT6 717 aaPredicted RBP30.37■■■□□ 2.45
PDF-201ENST00000288022 KBTBD3Q8NAB2 608 aa30.37■■■□□ 2.45
PDF-201ENST00000288022 PI4K2BQ8TCG2 481 aa30.37■■■□□ 2.45
PDF-201ENST00000288022 TRIM34Q9BYJ4 488 aa30.37■■■□□ 2.45
PDF-201ENST00000288022 PI4KBQ9UBF8 816 aa30.37■■■□□ 2.45
PDF-201ENST00000288022 HLA-DOAP06340 250 aa30.36■■■□□ 2.45
PDF-201ENST00000288022 UBE3CQ15386 1083 aa30.36■■■□□ 2.45
PDF-201ENST00000288022 SLC4A8Q2Y0W8 1093 aa30.36■■■□□ 2.45
PDF-201ENST00000288022 NOL9Q5SY16 702 aaKnown RBP30.36■■■□□ 2.45
PDF-201ENST00000288022 LAMB1P07942 1786 aa30.36■■■□□ 2.45
PDF-201ENST00000288022 CHGBP05060 677 aa30.35■■■□□ 2.45
PDF-201ENST00000288022 GTF2A2P52657 109 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms