RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.7□□□□□ -0.86
NIPBL-201ENST00000282516 IGSF22Q8N9C0 903 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 PDZD8Q8NEN9 1154 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 GLT8D2Q9H1C3 349 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 TRAF5O00463 557 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 PFDN6O15212 129 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 HIP1RO75146 1068 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 JADE1Q6IE81 842 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 RILPQ96NA2 401 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 TPX2Q9ULW0 747 aaKnown RBP9.7□□□□□ -0.86
NIPBL-201ENST00000282516 ZNF644Q9H582 1327 aaPredicted RBP9.7□□□□□ -0.86
NIPBL-201ENST00000282516 SPECC1L-ADORA2AF8WAN1 911 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 KRT15P19012 456 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 Q6ZUG5 572 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 SV2BQ7L1I2 683 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
NIPBL-201ENST00000282516 HAUS3Q68CZ6 603 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 TMX3Q96JJ7 454 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 FAM8A1Q9UBU6 413 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 TIAM1Q13009 1591 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 IQCDQ96DY2 449 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 DACT1Q9NYF0 836 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 SYT10Q6XYQ8 523 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 RAB17Q9H0T7 212 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 STRN3Q13033 797 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 DCUN1D2Q6PH85 259 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 FAM71BQ8TC56 605 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 SPDL1Q96EA4 605 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 GOLGA8CPA6NN73 597 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 P4HA1P13674 534 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 MCMDC2Q4G0Z9 681 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 CLSTN2Q9H4D0 955 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 PTPN23Q9H3S7 1636 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 GPTP24298 496 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 PPP2R5DQ14738 602 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 TRIM27P14373 513 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 PPP2R5EQ16537 467 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 MRRFQ96E11 262 aaKnown RBP9.69□□□□□ -0.86
NIPBL-201ENST00000282516 CARD10Q9BWT7 1032 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 PARP1P09874 1014 aaKnown RBP9.69□□□□□ -0.86
NIPBL-201ENST00000282516 KRT12Q99456 494 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 NOC4LQ9BVI4 516 aaKnown RBP9.69□□□□□ -0.86
NIPBL-201ENST00000282516 MYL5Q02045 173 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 SECISBP2LQ93073 1101 aaKnown RBP9.69□□□□□ -0.86
NIPBL-201ENST00000282516 TBC1D8O95759 1140 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 CFAP221Q4G0U5 840 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 RASEFQ8IZ41 740 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 MAIP1Q8WWC4 291 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 THUMPD2Q9BTF0 503 aaKnown RBP9.69□□□□□ -0.86
NIPBL-201ENST00000282516 KLHL14Q9P2G3 628 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 PPP1R9AQ9ULJ8 1098 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 CCDC61Q9Y6R9 512 aa9.69□□□□□ -0.86
NIPBL-201ENST00000282516 CABS1Q96KC9 395 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 MRPL46Q9H2W6 279 aaKnown RBP9.68□□□□□ -0.86
NIPBL-201ENST00000282516 DDX21Q9NR30 783 aaKnown RBP eCLIP9.68□□□□□ -0.86
NIPBL-201ENST00000282516 PPFIA3O75145 1194 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 PPP2R5CQ13362 524 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 STAG1Q8WVM7 1258 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 EVI5O60447 810 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 TRIM68Q6AZZ1 485 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 ZNF622Q969S3 477 aaKnown RBP eCLIP9.68□□□□□ -0.868e-7■■□□□ 13.7
NIPBL-201ENST00000282516 MAGEB6P1A0A0J9YX57 407 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 RGS16O15492 202 aaPredicted RBP9.68□□□□□ -0.86
NIPBL-201ENST00000282516 CCDC105Q8IYK2 499 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 RFC4P35249 363 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 MICAL1Q8TDZ2 1067 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 EPS15L1Q9UBC2 864 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 GSTA1P08263 222 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 GSTA2P09210 222 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 STX2P32856 288 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 AP1ARQ63HQ0 302 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 AMOTL2Q9Y2J4 779 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 F6X3S4 739 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 LPXNO60711 386 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 HAUS1Q96CS2 278 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 NUP58Q9BVL2 599 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 VPS37BQ9H9H4 285 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 NOD1Q9Y239 953 aa9.68□□□□□ -0.86
NIPBL-201ENST00000282516 HARSP12081 509 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 RAD51AP2Q09MP3 1159 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 NUDT16Q96DE0 195 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 ZBTB3Q9H5J0 574 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 ZBTB21Q9ULJ3 1066 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 PFDN1O60925 122 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 S100BP04271 92 aaPredicted RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 DNM1Q05193 864 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 KRT71Q3SY84 523 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 RPGRIP1Q96KN7 1286 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 MAP3K7CLP57077 242 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 C16orf71Q8IYS4 520 aaPredicted RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 ZNF277Q9NRM2 450 aaPredicted RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 ZRANB1Q9UGI0 708 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 PPME1Q9Y570 386 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 NUCB1Q02818 461 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 LRCH2Q5VUJ6 765 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 FCHSD1Q86WN1 690 aa9.67□□□□□ -0.86
NIPBL-201ENST00000282516 RIOK1Q9BRS2 568 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 RBM26Q5T8P6 1007 aaKnown RBP9.67□□□□□ -0.86
NIPBL-201ENST00000282516 HELBQ8NG08 1087 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms