RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 PDLIM2Q96JY6 352 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 MCM9Q9NXL9 1143 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 COL16A1Q07092 1604 aaPredicted RBP7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 ELP1O95163 1332 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 TNKSO95271 1327 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 ZMYM6O95789 1325 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 RIMBP2O15034 1052 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 C11orf57Q6ZUT1 292 aaPredicted RBP7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 TRIM22Q8IYM9 498 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 RPGRQ92834 1020 aaKnown RBP7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 GJD4Q96KN9 370 aaPredicted RBP7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 KRT23Q9C075 422 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 NYXQ9GZU5 481 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 LRRC4BQ9NT99 713 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 SAP30BPQ9UHR5 308 aaKnown RBP7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 ZKSCAN5Q9Y2L8 839 aa7.02□□□□□ -1.29
TNFSF4-201ENST00000281834 LRP6O75581 1613 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 ZNF804BA4D1E1 1349 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 C6orf229H3BNL8 230 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 CDKL5O76039 1030 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 KIF23Q02241 960 aaPredicted RBP7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 UBE4AQ14139 1066 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 FILIP1Q7Z7B0 1213 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 MRPS27Q92552 414 aaKnown RBP7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 VPS54Q9P1Q0 977 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 TAF1P21675 1872 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 SALL1Q9NSC2 1324 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 USP5P45974 858 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 SF3B3Q15393 1217 aaKnown RBP7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 SAFBQ15424 915 aaKnown RBP eCLIP7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 PTPN21Q16825 1174 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 IFIT1BQ5T764 474 aaKnown RBP7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 ANO1Q5XXA6 986 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 OLFM4Q6UX06 510 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 ZNF654Q8IZM8 581 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 ESR2Q92731 530 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 TMEM87BQ96K49 555 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 ZNF512BQ96KM6 892 aaPredicted RBP7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 QTRT2Q9H974 415 aaKnown RBP7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 NRBP1Q9UHY1 535 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 RCOR1Q9UKL0 485 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 NOL7Q9UMY1 257 aaKnown RBP7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 PHLPP1O60346 1717 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 NUP98P52948 1817 aa7.01□□□□□ -1.29
TNFSF4-201ENST00000281834 TSPY2A6NKD2 308 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 USP17L8P0C7I0 530 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 PDIA4P13667 645 aaKnown RBP7□□□□□ -1.29
TNFSF4-201ENST00000281834 PTGS1P23219 599 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 MSL1Q68DK7 614 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 DIS3L2Q8IYB7 885 aaKnown RBP7□□□□□ -1.29
TNFSF4-201ENST00000281834 LINC00301Q8NCQ3 95 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 ZNF384Q8TF68 577 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 DYNLL2Q96FJ2 89 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 FUCA2Q9BTY2 467 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 CNNM2Q9H8M5 875 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 V9GY48 417 aaPredicted RBP7□□□□□ -1.29
TNFSF4-201ENST00000281834 BCL9LQ86UU0 1499 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 RAD21O60216 631 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 UFL1O94874 794 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 FAM160A1Q05DH4 1040 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 GRIK5Q16478 980 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 IQCA1Q86XH1 822 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 AOPEPQ8N6M6 819 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 SLC44A5Q8NCS7 719 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 RNF41Q9H4P4 317 aaPredicted RBP7□□□□□ -1.29
TNFSF4-201ENST00000281834 EIF2AK3Q9NZJ5 1116 aaKnown RBP7□□□□□ -1.29
TNFSF4-201ENST00000281834 STX8Q9UNK0 236 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 FAM205CA6NFA0 338 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 WDHD1O75717 1129 aaPredicted RBP7□□□□□ -1.29
TNFSF4-201ENST00000281834 PLEKHA8P1O95397 391 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 GNAT2P19087 354 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 LRMPQ12912 555 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 CCDC186Q7Z3E2 898 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 MAPKAPK5Q8IW41 473 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 OXER1Q8TDS5 423 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 CABP5Q9NP86 173 aa7□□□□□ -1.29
TNFSF4-201ENST00000281834 FAM217BQ9NTX9 383 aaPredicted RBP7□□□□□ -1.29
TNFSF4-201ENST00000281834 MYO5AQ9Y4I1 1855 aaKnown RBP7□□□□□ -1.29
TNFSF4-201ENST00000281834 FANCBQ8NB91 859 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 TGFBRAP1Q8WUH2 860 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 NSUN4Q96CB9 384 aaKnown RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 CRNKL1Q9BZJ0 848 aaKnown RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 PAPPAQ13219 1627 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 COL4A1P02462 1669 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 ZNF202O95125 648 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 LDHBP07195 334 aaKnown RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 PFKFB1P16118 471 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 RBM10P98175 930 aaKnown RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 SNW1Q13573 536 aaKnown RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 CATIPQ7Z7H3 387 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 FNBP4Q8N3X1 1017 aaPredicted RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 ENAHQ8N8S7 591 aaPredicted RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 KCNG4Q8TDN1 519 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 RIOK1Q9BRS2 568 aaKnown RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 CPVLQ9H3G5 476 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 MKNK2Q9HBH9 465 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 SLC3A2P08195 630 aaKnown RBP6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 UVSSAQ2YD98 709 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 DPCR1Q3MIW9 517 aa6.99□□□□□ -1.29
TNFSF4-201ENST00000281834 CTR9Q6PD62 1173 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms