RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 WDR24Q96S15 920 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 HAUS7Q99871 368 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 BCORQ6W2J9 1755 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 NUP98P52948 1817 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 SPTLC2O15270 562 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 UBE3BQ7Z3V4 1068 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 AK7Q96M32 723 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 A0A1W2PQ27 194 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 A0A1W2PQ64 194 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 ATP5J2-PTCD1G3V325 749 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 DDX58O95786 925 aaKnown RBP13.07□□□□□ -0.32
SCLT1-201ENST00000281142 TEX35Q5T0J7 233 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 HSPD1P10809 573 aaKnown RBP13.07□□□□□ -0.32
SCLT1-201ENST00000281142 UBASH3AP57075 661 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 CFAP100Q494V2 611 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 KBTBD3Q8NAB2 608 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 BPIFA3Q9BQP9 254 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 AGXT2Q9BYV1 514 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 SERPINC1P01008 464 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 TIMM10P62072 90 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 GNL2Q13823 731 aaKnown RBP13.07□□□□□ -0.32
SCLT1-201ENST00000281142 AXDND1Q5T1B0 1012 aaPredicted RBP13.07□□□□□ -0.32
SCLT1-201ENST00000281142 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 AIFM3Q96NN9 605 aa13.07□□□□□ -0.32
SCLT1-201ENST00000281142 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
SCLT1-201ENST00000281142 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
SCLT1-201ENST00000281142 PNOCQ13519 176 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 MYSM1Q5VVJ2 828 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
SCLT1-201ENST00000281142 DZIP3Q86Y13 1208 aaKnown RBP13.06□□□□□ -0.32
SCLT1-201ENST00000281142 C8orf76Q96K31 380 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 ARGLU1Q9NWB6 273 aaPredicted RBP13.06□□□□□ -0.32
SCLT1-201ENST00000281142 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 ANKRD36CQ5JPF3 1778 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 HSP90AB3PQ58FF7 597 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 ATL3Q6DD88 541 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 ZSWIM4Q9H7M6 989 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 INTS13Q9NVM9 706 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 LCMT1Q9UIC8 334 aa13.06□□□□□ -0.32
SCLT1-201ENST00000281142 HMGB1P09429 215 aaKnown RBP13.05□□□□□ -0.32
SCLT1-201ENST00000281142 KCNJ6P48051 423 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 HLFQ16534 295 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 TMEM139Q8IV31 216 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 UBXN6Q9BZV1 441 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 MAST3O60307 1309 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 SH3TC1Q8TE82 1336 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 M0R2C6 588 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 KIF6Q6ZMV9 814 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 ARHGEF1Q92888 912 aaKnown RBP13.05□□□□□ -0.32
SCLT1-201ENST00000281142 FANCLQ9NW38 375 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 RSPH14Q9UHP6 348 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
SCLT1-201ENST00000281142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
SCLT1-201ENST00000281142 NRDCO43847 1150 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 GNG11P61952 73 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 TPM4P67936 248 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 SMC1AQ14683 1233 aaKnown RBP13.04□□□□□ -0.32
SCLT1-201ENST00000281142 LRRFIP1Q32MZ4 808 aaKnown RBP13.04□□□□□ -0.32
SCLT1-201ENST00000281142 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 DESI2Q9BSY9 194 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 IRX2Q9BZI1 471 aaPredicted RBP13.04□□□□□ -0.32
SCLT1-201ENST00000281142 PAG1Q9NWQ8 432 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 EFCAB8A8MWE9 144 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 CDC27P30260 824 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 PDE4BQ07343 736 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 TEX2Q8IWB9 1127 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
SCLT1-201ENST00000281142 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 POLR3EQ9NVU0 708 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 H3BQF6 201 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 TRIM66O15016 1216 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 FOXN1O15353 648 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 ANO1Q5XXA6 986 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 FBXO18Q8NFZ0 1043 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 METTL22Q9BUU2 404 aaPredicted RBP13.04□□□□□ -0.32
SCLT1-201ENST00000281142 DENND2AQ9ULE3 1009 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
SCLT1-201ENST00000281142 QSER1Q2KHR3 1735 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 YEATS4O95619 227 aa13.03□□□□□ -0.32
SCLT1-201ENST00000281142 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
SCLT1-201ENST00000281142 ADKP55263 362 aaKnown RBP13.03□□□□□ -0.32
SCLT1-201ENST00000281142 KARSQ15046 597 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms