RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 GTPBP4Q9BZE4 634 aaKnown RBP11.03□□□□□ -0.64
PDCD4-201ENST00000280154 INO80BQ9C086 356 aaPredicted RBP11.03□□□□□ -0.64
PDCD4-201ENST00000280154 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
PDCD4-201ENST00000280154 RFC4P35249 363 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 SCNN1AP37088 669 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 TBX4P57082 545 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 ATG9AQ7Z3C6 839 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 RABEP2Q9H5N1 569 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 CENPQQ7L2Z9 268 aaPredicted RBP11.03□□□□□ -0.64
PDCD4-201ENST00000280154 ZBTB3Q9H5J0 574 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 BICC1Q9H694 974 aaKnown RBP11.03□□□□□ -0.64
PDCD4-201ENST00000280154 CHCHD3Q9NX63 227 aaKnown RBP11.03□□□□□ -0.64
PDCD4-201ENST00000280154 ZPR1O75312 459 aa11.02□□□□□ -0.64
PDCD4-201ENST00000280154 KCNA3P22001 575 aa11.02□□□□□ -0.64
PDCD4-201ENST00000280154 NUCB1Q02818 461 aa11.02□□□□□ -0.64
PDCD4-201ENST00000280154 SPC24Q8NBT2 197 aa11.02□□□□□ -0.64
PDCD4-201ENST00000280154 VPS37AQ8NEZ2 397 aa11.02□□□□□ -0.64
PDCD4-201ENST00000280154 MYCLP1P12525 358 aaPredicted RBP11.02□□□□□ -0.65
PDCD4-201ENST00000280154 KIAA2012Q0VF49 1180 aa11.02□□□□□ -0.65
PDCD4-201ENST00000280154 RTFDC1Q9BY42 306 aaPredicted RBP11.02□□□□□ -0.65
PDCD4-201ENST00000280154 LNPKQ9C0E8 428 aa11.02□□□□□ -0.65
PDCD4-201ENST00000280154 PRSS47A8MTI9 375 aa11.02□□□□□ -0.65
PDCD4-201ENST00000280154 LDHCP07864 332 aa11.02□□□□□ -0.65
PDCD4-201ENST00000280154 UBTFL1P0CB47 393 aaPredicted RBP11.02□□□□□ -0.65
PDCD4-201ENST00000280154 FGFR2P21802 821 aa11.02□□□□□ -0.65
PDCD4-201ENST00000280154 TRIM29Q14134 588 aa11.02□□□□□ -0.65
PDCD4-201ENST00000280154 PTPROQ16827 1216 aa11.02□□□□□ -0.65
PDCD4-201ENST00000280154 IPO9Q96P70 1041 aaKnown RBP11.02□□□□□ -0.65
PDCD4-201ENST00000280154 CPSF2Q9P2I0 782 aaKnown RBP11.02□□□□□ -0.65
PDCD4-201ENST00000280154 STAP2Q9UGK3 403 aa11.02□□□□□ -0.65
PDCD4-201ENST00000280154 PAPPA2Q9BXP8 1791 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 MYSM1Q5VVJ2 828 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 RSPH14Q9UHP6 348 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 LRRFIP2Q9Y608 721 aaKnown RBP11.01□□□□□ -0.65
PDCD4-201ENST00000280154 CCDC88AQ3V6T2 1871 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 RFX7Q2KHR2 1363 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 PNMA6EA0A0J9YXQ4 647 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 SOCS7O14512 581 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 KCNA2P16389 499 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 SLC7A5Q01650 507 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 SLMAPQ14BN4 828 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 FXNQ16595 210 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 ZNF394Q53GI3 561 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDCD4-201ENST00000280154 SPACA7Q96KW9 195 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 FEZ1Q99689 392 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 PPP1R12AO14974 1030 aaPredicted RBP11.01□□□□□ -0.65
PDCD4-201ENST00000280154 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 SEZ6LQ9BYH1 1024 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 IGSF5Q9NSI5 407 aa11.01□□□□□ -0.65
PDCD4-201ENST00000280154 NIP7Q9Y221 180 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDCD4-201ENST00000280154 NEFHP12036 1026 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 COPB2P35606 906 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 ERFEQ4G0M1 354 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 C3orf67Q6ZVT6 689 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 TBC1D31Q96DN5 1066 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 TANGO6Q9C0B7 1094 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 CD2APQ9Y5K6 639 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 SERPINB2P05120 415 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 CLCN1P35523 988 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 TGFB2P61812 414 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 TTC39BQ5VTQ0 682 aaPredicted RBP11□□□□□ -0.65
PDCD4-201ENST00000280154 KIF2CQ99661 725 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 RANBP17Q9H2T7 1088 aaKnown RBP11□□□□□ -0.65
PDCD4-201ENST00000280154 PIF1Q9H611 641 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 SCHIP1Q9P0W5 487 aaPredicted RBP11□□□□□ -0.65
PDCD4-201ENST00000280154 EVLQ9UI08 416 aaPredicted RBP11□□□□□ -0.65
PDCD4-201ENST00000280154 LTBP3Q9NS15 1303 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 ADAMTSL1Q8N6G6 1762 aa11□□□□□ -0.65
PDCD4-201ENST00000280154 HMMRO75330 724 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 TPTE2Q6XPS3 522 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 SNX21Q969T3 373 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 TIGD1Q96MW7 591 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 VPS33BQ9H267 617 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 TFCP2L1Q9NZI6 479 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 IRS4O14654 1257 aaPredicted RBP10.99□□□□□ -0.65
PDCD4-201ENST00000280154 SRGNP10124 158 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 AIMP1Q12904 312 aaKnown RBP10.99□□□□□ -0.65
PDCD4-201ENST00000280154 BMS1Q14692 1282 aaKnown RBP10.99□□□□□ -0.65
PDCD4-201ENST00000280154 NFXL1Q6ZNB6 911 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 GOLGA6L1Q8N7Z2 621 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 ZNF804BA4D1E1 1349 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 ZNF16P17020 682 aaPredicted RBP10.99□□□□□ -0.65
PDCD4-201ENST00000280154 MAP2K2P36507 400 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 ZSCAN30Q86W11 494 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 RWDD1Q9H446 243 aaPredicted RBP10.99□□□□□ -0.65
PDCD4-201ENST00000280154 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
PDCD4-201ENST00000280154 ATF5Q9Y2D1 282 aaPredicted RBP10.99□□□□□ -0.65
PDCD4-201ENST00000280154 CHD4Q14839 1912 aa10.99□□□□□ -0.65
PDCD4-201ENST00000280154 MYO5AQ9Y4I1 1855 aaKnown RBP10.99□□□□□ -0.65
PDCD4-201ENST00000280154 MAP9Q49MG5 647 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 PPP4R4Q6NUP7 873 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 TRIM74Q86UV6 250 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 TRIM73Q86UV7 250 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 ATP5J2-PTCD1G3V325 749 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 LDHAP00338 332 aaKnown RBP10.98□□□□□ -0.65
PDCD4-201ENST00000280154 ZSWIM4Q9H7M6 989 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 FEZ2Q9UHY8 353 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms