RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ECE2O60344 883 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 CYB5R4Q7L1T6 521 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 BRPF3Q9ULD4 1205 aa24.66■■□□□ 1.54
YBX3-202ENST00000279550 NAP1L2Q9ULW6 460 aaPredicted RBP24.66■■□□□ 1.54
YBX3-202ENST00000279550 MAST2Q6P0Q8 1798 aa24.65■■□□□ 1.54
YBX3-202ENST00000279550 GRIK5Q16478 980 aa24.65■■□□□ 1.54
YBX3-202ENST00000279550 FERMT3Q86UX7 667 aa24.65■■□□□ 1.54
YBX3-202ENST00000279550 LLPHQ9BRT6 129 aaKnown RBP24.65■■□□□ 1.54
YBX3-202ENST00000279550 FHDC1Q9C0D6 1143 aaPredicted RBP24.65■■□□□ 1.54
YBX3-202ENST00000279550 INCENPQ9NQS7 918 aa24.65■■□□□ 1.54
YBX3-202ENST00000279550 TIAM2Q8IVF5 1701 aa24.65■■□□□ 1.54
YBX3-202ENST00000279550 NEDD4P46934 1319 aa24.64■■□□□ 1.54
YBX3-202ENST00000279550 WDR19Q8NEZ3 1342 aa24.64■■□□□ 1.54
YBX3-202ENST00000279550 DNM1Q05193 864 aaKnown RBP24.64■■□□□ 1.54
YBX3-202ENST00000279550 VPS33BQ9H267 617 aa24.64■■□□□ 1.54
YBX3-202ENST00000279550 ZNF277Q9NRM2 450 aaPredicted RBP24.64■■□□□ 1.54
YBX3-202ENST00000279550 SLC4A4Q9Y6R1 1079 aa24.64■■□□□ 1.54
YBX3-202ENST00000279550 XRCC6P12956 609 aaKnown RBP eCLIP24.64■■□□□ 1.53
YBX3-202ENST00000279550 CTDSPL2Q05D32 466 aa24.64■■□□□ 1.53
YBX3-202ENST00000279550 ZSCAN23Q3MJ62 389 aa24.64■■□□□ 1.53
YBX3-202ENST00000279550 FBXW7Q969H0 707 aa24.64■■□□□ 1.53
YBX3-202ENST00000279550 NAPBQ9H115 298 aa24.64■■□□□ 1.53
YBX3-202ENST00000279550 TMEM63CQ9P1W3 806 aa24.64■■□□□ 1.53
YBX3-202ENST00000279550 ATP6V1DQ9Y5K8 247 aa24.64■■□□□ 1.53
YBX3-202ENST00000279550 SRCAPQ6ZRS2 3230 aa24.63■■□□□ 1.53
YBX3-202ENST00000279550 PTPDC1A2A3K4 754 aa24.63■■□□□ 1.53
YBX3-202ENST00000279550 MBD3O95983 291 aa24.63■■□□□ 1.53
YBX3-202ENST00000279550 CCDC88AQ3V6T2 1871 aa24.62■■□□□ 1.53
YBX3-202ENST00000279550 B4E1Z4 1266 aa24.62■■□□□ 1.53
YBX3-202ENST00000279550 KCNQ5Q9NR82 932 aa24.62■■□□□ 1.53
YBX3-202ENST00000279550 HPS5Q9UPZ3 1129 aa24.62■■□□□ 1.53
YBX3-202ENST00000279550 KLF18A0A0U1RQI7 1052 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 FIBPO43427 364 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 GNAT2P19087 354 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 FAM173BQ6P4H8 233 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 TAOK3Q9H2K8 898 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 SUGT1Q9Y2Z0 365 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 MAGEB6P1A0A0J9YX57 407 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 PDIA4P13667 645 aaKnown RBP24.61■■□□□ 1.53
YBX3-202ENST00000279550 GSTO1P78417 241 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 TRDNQ13061 729 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 STRIP1Q5VSL9 837 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 RAB11FIP4Q86YS3 637 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 LARGE2Q8N3Y3 721 aa24.61■■□□□ 1.53
YBX3-202ENST00000279550 RIOK1Q9BRS2 568 aaKnown RBP24.61■■□□□ 1.53
YBX3-202ENST00000279550 FER1L6Q2WGJ9 1857 aa24.6■■□□□ 1.53
YBX3-202ENST00000279550 PPFIA3O75145 1194 aa24.6■■□□□ 1.53
YBX3-202ENST00000279550 ZNF445P59923 1031 aa24.6■■□□□ 1.53
YBX3-202ENST00000279550 DYNLL1P63167 89 aaKnown RBP24.6■■□□□ 1.53
YBX3-202ENST00000279550 CERS5Q8N5B7 392 aa24.6■■□□□ 1.53
YBX3-202ENST00000279550 GOLGA8BA8MQT2 603 aa24.59■■□□□ 1.53
YBX3-202ENST00000279550 NFKBIEO00221 500 aa24.59■■□□□ 1.53
YBX3-202ENST00000279550 SH2B2O14492 632 aaPredicted RBP24.59■■□□□ 1.53
YBX3-202ENST00000279550 TDO2P48775 406 aa24.59■■□□□ 1.53
YBX3-202ENST00000279550 DIXDC1Q155Q3 683 aa24.59■■□□□ 1.53
YBX3-202ENST00000279550 GRPEL1Q9HAV7 217 aa24.59■■□□□ 1.53
YBX3-202ENST00000279550 ISY1Q9ULR0 285 aaKnown RBP24.59■■□□□ 1.53
YBX3-202ENST00000279550 USP17L3A6NCW0 530 aa24.58■■□□□ 1.53
YBX3-202ENST00000279550 USP17L4A6NCW7 530 aa24.58■■□□□ 1.53
YBX3-202ENST00000279550 YDJCA8MPS7 323 aa24.58■■□□□ 1.53
YBX3-202ENST00000279550 IARSP41252 1262 aaKnown RBP24.58■■□□□ 1.53
YBX3-202ENST00000279550 FOSBP53539 338 aa24.58■■□□□ 1.53
YBX3-202ENST00000279550 RESTQ13127 1097 aa24.58■■□□□ 1.53
YBX3-202ENST00000279550 USP17L1Q7RTZ2 530 aa24.58■■□□□ 1.53
YBX3-202ENST00000279550 SENP2Q9HC62 589 aa24.58■■□□□ 1.53
YBX3-202ENST00000279550 SCN9AQ15858 1988 aa24.58■■□□□ 1.53
YBX3-202ENST00000279550 MRE11P49959 708 aa24.58■■□□□ 1.52
YBX3-202ENST00000279550 FAM184AQ8NB25 1140 aa24.58■■□□□ 1.52
YBX3-202ENST00000279550 SDR42E1Q8WUS8 393 aa24.58■■□□□ 1.52
YBX3-202ENST00000279550 MXD3Q9BW11 206 aa24.58■■□□□ 1.52
YBX3-202ENST00000279550 PANK2Q9BZ23 570 aa24.58■■□□□ 1.52
YBX3-202ENST00000279550 NACAP1Q9BZK3 213 aa24.58■■□□□ 1.52
YBX3-202ENST00000279550 COL4A5P29400 1685 aa24.58■■□□□ 1.52
YBX3-202ENST00000279550 ARFGEF1Q9Y6D6 1849 aa24.57■■□□□ 1.52
YBX3-202ENST00000279550 FKBP1AP62942 108 aaKnown RBP24.57■■□□□ 1.52
YBX3-202ENST00000279550 HMGN5P82970 282 aaKnown RBP24.57■■□□□ 1.52
YBX3-202ENST00000279550 DACT2Q5SW24 774 aa24.57■■□□□ 1.52
YBX3-202ENST00000279550 SYT17Q9BSW7 474 aa24.57■■□□□ 1.52
YBX3-202ENST00000279550 AATFQ9NY61 560 aaKnown RBP eCLIP24.57■■□□□ 1.52
YBX3-202ENST00000279550 LDHCP07864 332 aa24.56■■□□□ 1.52
YBX3-202ENST00000279550 FDPSP14324 419 aaKnown RBP24.56■■□□□ 1.52
YBX3-202ENST00000279550 AKNAD1Q5T1N1 836 aa24.56■■□□□ 1.52
YBX3-202ENST00000279550 ANGEL1Q9UNK9 670 aaKnown RBP24.56■■□□□ 1.52
YBX3-202ENST00000279550 MROH7-TTC4A0A0A0MT08 1334 aa24.56■■□□□ 1.52
YBX3-202ENST00000279550 LTBP3Q9NS15 1303 aa24.56■■□□□ 1.52
YBX3-202ENST00000279550 SLF2Q8IX21 1173 aa24.55■■□□□ 1.52
YBX3-202ENST00000279550 ZNF646O15015 1829 aaPredicted RBP24.55■■□□□ 1.52
YBX3-202ENST00000279550 SMIM22K7EJ46 135 aa24.55■■□□□ 1.52
YBX3-202ENST00000279550 NIM1KQ8IY84 436 aa24.55■■□□□ 1.52
YBX3-202ENST00000279550 IGDCC4Q8TDY8 1250 aa24.55■■□□□ 1.52
YBX3-202ENST00000279550 STAG1Q8WVM7 1258 aa24.55■■□□□ 1.52
YBX3-202ENST00000279550 FAM163AQ96GL9 167 aaPredicted RBP24.55■■□□□ 1.52
YBX3-202ENST00000279550 F8W031 263 aaPredicted RBP24.54■■□□□ 1.52
YBX3-202ENST00000279550 H3BQV1 296 aa24.54■■□□□ 1.52
YBX3-202ENST00000279550 KDM4AO75164 1064 aa24.54■■□□□ 1.52
YBX3-202ENST00000279550 TPRNQ4KMQ1 711 aa24.54■■□□□ 1.52
YBX3-202ENST00000279550 IFFO2Q5TF58 517 aa24.54■■□□□ 1.52
YBX3-202ENST00000279550 TTF2Q9UNY4 1162 aaKnown RBP24.54■■□□□ 1.52
YBX3-202ENST00000279550 UTRNP46939 3433 aa24.54■■□□□ 1.52
YBX3-202ENST00000279550 UBE2HP62256 183 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms