RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 ENTPD3O75355 529 aa20.57■□□□□ 0.88
SKP2-201ENST00000274254 FGAP02671 866 aa20.57■□□□□ 0.88
SKP2-201ENST00000274254 APPP05067 770 aa20.57■□□□□ 0.88
SKP2-201ENST00000274254 ANGEL2Q5VTE6 544 aaKnown RBP20.57■□□□□ 0.88
SKP2-201ENST00000274254 MAPKAPK5Q8IW41 473 aa20.57■□□□□ 0.88
SKP2-201ENST00000274254 NACAP1Q9BZK3 213 aa20.57■□□□□ 0.88
SKP2-201ENST00000274254 VEZTQ9HBM0 779 aa20.57■□□□□ 0.88
SKP2-201ENST00000274254 GGA3Q9NZ52 723 aa20.57■□□□□ 0.88
SKP2-201ENST00000274254 BAZ2AQ9UIF9 1905 aaKnown RBP20.57■□□□□ 0.88
SKP2-201ENST00000274254 NAV1Q8NEY1 1877 aa20.56■□□□□ 0.88
SKP2-201ENST00000274254 CNTNAP1P78357 1384 aa20.56■□□□□ 0.88
SKP2-201ENST00000274254 TCP10L2B9ZVM9 353 aa20.56■□□□□ 0.88
SKP2-201ENST00000274254 PICALMQ13492 652 aa20.56■□□□□ 0.88
SKP2-201ENST00000274254 FAM83AQ86UY5 434 aa20.56■□□□□ 0.88
SKP2-201ENST00000274254 OSBPL5Q9H0X9 879 aaPredicted RBP20.56■□□□□ 0.88
SKP2-201ENST00000274254 TNFAIP1Q13829 316 aa20.55■□□□□ 0.88
SKP2-201ENST00000274254 APOBEC3FQ8IUX4 373 aaKnown RBP20.55■□□□□ 0.88
SKP2-201ENST00000274254 DDRGK1Q96HY6 314 aa20.55■□□□□ 0.88
SKP2-201ENST00000274254 NAPBQ9H115 298 aa20.55■□□□□ 0.88
SKP2-201ENST00000274254 POLR2AP24928 1970 aaKnown RBP20.55■□□□□ 0.88
SKP2-201ENST00000274254 COL2A1P02458 1487 aaPredicted RBP20.55■□□□□ 0.88
SKP2-201ENST00000274254 TDO2P48775 406 aa20.54■□□□□ 0.88
SKP2-201ENST00000274254 TCP10Q12799 353 aa20.54■□□□□ 0.88
SKP2-201ENST00000274254 EAPPQ56P03 285 aaPredicted RBP20.54■□□□□ 0.88
SKP2-201ENST00000274254 ZFPM1Q8IX07 1006 aa20.54■□□□□ 0.88
SKP2-201ENST00000274254 USP26Q9BXU7 913 aa20.54■□□□□ 0.88
SKP2-201ENST00000274254 MCM9Q9NXL9 1143 aa20.54■□□□□ 0.88
SKP2-201ENST00000274254 U3KPZ7 1027 aaPredicted RBP20.54■□□□□ 0.88
SKP2-201ENST00000274254 MYH1P12882 1939 aa20.54■□□□□ 0.88
SKP2-201ENST00000274254 ATRNL1Q5VV63 1379 aa20.54■□□□□ 0.88
SKP2-201ENST00000274254 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 CTR9Q6PD62 1173 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 FAM151AQ8WW52 585 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 ARPP21Q9UBL0 812 aaPredicted RBP20.53■□□□□ 0.88
SKP2-201ENST00000274254 RBM8AQ9Y5S9 174 aaKnown RBP20.53■□□□□ 0.88
SKP2-201ENST00000274254 USP17L12C9JPN9 530 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 USP17L21D6R901 530 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 POTEIP0CG38 1075 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 POTEJP0CG39 1038 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 TNNI2P48788 182 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 RASA3Q14644 834 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 NECTIN1Q15223 517 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 CTNNA3Q9UI47 895 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 PALD1Q9ULE6 856 aa20.53■□□□□ 0.88
SKP2-201ENST00000274254 SH3BP5LQ7L8J4 393 aa20.52■□□□□ 0.87
SKP2-201ENST00000274254 DCPSQ96C86 337 aaKnown RBP20.52■□□□□ 0.87
SKP2-201ENST00000274254 DEFB129Q9H1M3 183 aa20.52■□□□□ 0.87
SKP2-201ENST00000274254 DHX36Q9H2U1 1008 aaKnown RBP20.52■□□□□ 0.87
SKP2-201ENST00000274254 GPBP1L1Q9HC44 474 aaPredicted RBP20.52■□□□□ 0.87
SKP2-201ENST00000274254 SAP30BPQ9UHR5 308 aaKnown RBP20.52■□□□□ 0.87
SKP2-201ENST00000274254 SCAF8Q9UPN6 1271 aaKnown RBP20.52■□□□□ 0.87
SKP2-201ENST00000274254 DDTLA6NHG4 134 aaPredicted RBP20.51■□□□□ 0.87
SKP2-201ENST00000274254 C12orf60Q5U649 245 aa20.51■□□□□ 0.87
SKP2-201ENST00000274254 LDHDQ86WU2 507 aa20.51■□□□□ 0.87
SKP2-201ENST00000274254 TMEM39BQ9GZU3 492 aa20.51■□□□□ 0.87
SKP2-201ENST00000274254 LAMA4Q16363 1823 aa20.5■□□□□ 0.87
SKP2-201ENST00000274254 TEPSINQ96N21 525 aa20.5■□□□□ 0.87
SKP2-201ENST00000274254 PPP2R3BQ9Y5P8 575 aa20.5■□□□□ 0.87
SKP2-201ENST00000274254 LAMB1P07942 1786 aa20.5■□□□□ 0.87
SKP2-201ENST00000274254 CYP2D7A0A087X1C5 515 aa20.49■□□□□ 0.87
SKP2-201ENST00000274254 POLR3DP05423 398 aaPredicted RBP20.49■□□□□ 0.87
SKP2-201ENST00000274254 CYP2D6P10635 497 aa20.49■□□□□ 0.87
SKP2-201ENST00000274254 YY1P25490 414 aa20.49■□□□□ 0.87
SKP2-201ENST00000274254 HSPA4P34932 840 aa20.49■□□□□ 0.87
SKP2-201ENST00000274254 PLCD1P51178 756 aa20.49■□□□□ 0.87
SKP2-201ENST00000274254 EVX2Q03828 476 aa20.49■□□□□ 0.87
SKP2-201ENST00000274254 SULF1Q8IWU6 871 aa20.49■□□□□ 0.87
SKP2-201ENST00000274254 ANAPC4Q9UJX5 808 aa20.49■□□□□ 0.87
SKP2-201ENST00000274254 SIPA1L1O43166 1804 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 SMIM22K7EJ46 135 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 CYP21A2P08686 494 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 PPARAQ07869 468 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 IMMTQ16891 758 aaKnown RBP20.48■□□□□ 0.87
SKP2-201ENST00000274254 KRT26Q7Z3Y9 468 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 TTC6Q86TZ1 520 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 ZSCAN29Q8IWY8 852 aaPredicted RBP20.48■□□□□ 0.87
SKP2-201ENST00000274254 CDAN1Q8IWY9 1227 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 AMOTL1Q8IY63 956 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 MINDY4BA8MYZ0 360 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 ZNF213O14771 459 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 SLC27A2O14975 620 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 SLC4A8Q2Y0W8 1093 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 CREB3L3Q68CJ9 461 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 KCNB2Q92953 911 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 NBPF3Q9H094 633 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 EHD4Q9H223 541 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 PI4KBQ9UBF8 816 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
SKP2-201ENST00000274254 ROBO3Q96MS0 1386 aa20.47■□□□□ 0.87
SKP2-201ENST00000274254 ADM5C9JUS6 153 aa20.47■□□□□ 0.87
SKP2-201ENST00000274254 KIF3CO14782 793 aa20.47■□□□□ 0.87
SKP2-201ENST00000274254 HLA-DOAP06340 250 aa20.47■□□□□ 0.87
SKP2-201ENST00000274254 HAND2P61296 217 aa20.47■□□□□ 0.87
SKP2-201ENST00000274254 CDC37L1Q7L3B6 337 aa20.47■□□□□ 0.87
SKP2-201ENST00000274254 METTL16Q86W50 562 aaKnown RBP20.47■□□□□ 0.87
SKP2-201ENST00000274254 CSRNP1Q96S65 589 aa20.47■□□□□ 0.87
SKP2-201ENST00000274254 GABPAQ06546 454 aa20.46■□□□□ 0.87
SKP2-201ENST00000274254 RNF20Q5VTR2 975 aa20.46■□□□□ 0.87
SKP2-201ENST00000274254 UPF2Q9HAU5 1272 aaKnown RBP20.46■□□□□ 0.87
SKP2-201ENST00000274254 TSGA10IPQ3SY00 556 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms