RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CASQ1P31415 396 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 NTRK3Q16288 839 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 METTL24Q5JXM2 366 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 SRRTQ9BXP5 876 aaKnown RBP31.55■■■□□ 2.64
CBX4-201ENST00000269397 FAM217BQ9NTX9 383 aaPredicted RBP31.55■■■□□ 2.64
CBX4-201ENST00000269397 NFE2L3Q9Y4A8 694 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 SASH3O75995 380 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 CYP2C19P33261 490 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 ADD2P35612 726 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 IFIT5Q13325 482 aaKnown RBP31.55■■■□□ 2.64
CBX4-201ENST00000269397 CCDC82Q8N4S0 544 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.55■■■□□ 2.64
CBX4-201ENST00000269397 PIH1D3Q9NQM4 214 aaKnown RBP31.54■■■□□ 2.64
CBX4-201ENST00000269397 MAN1B1Q9UKM7 699 aa31.54■■■□□ 2.64
CBX4-201ENST00000269397 WDR19Q8NEZ3 1342 aa31.54■■■□□ 2.64
CBX4-201ENST00000269397 BTBD18B2RXH4 712 aa31.54■■■□□ 2.64
CBX4-201ENST00000269397 GUCY1A2P33402 732 aa31.54■■■□□ 2.64
CBX4-201ENST00000269397 KARSQ15046 597 aaKnown RBP31.54■■■□□ 2.64
CBX4-201ENST00000269397 NUP188Q5SRE5 1749 aa31.54■■■□□ 2.64
CBX4-201ENST00000269397 LAMB4A4D0S4 1761 aa31.54■■■□□ 2.64
CBX4-201ENST00000269397 FAM237AA0A1B0GTK4 181 aa31.53■■■□□ 2.64
CBX4-201ENST00000269397 TC2NQ8N9U0 490 aa31.53■■■□□ 2.64
CBX4-201ENST00000269397 CCDC34Q96HJ3 373 aa31.53■■■□□ 2.64
CBX4-201ENST00000269397 KCNJ14Q9UNX9 436 aa31.53■■■□□ 2.64
CBX4-201ENST00000269397 TMEM67Q5HYA8 995 aa31.53■■■□□ 2.64
CBX4-201ENST00000269397 KRI1Q8N9T8 703 aaKnown RBP31.53■■■□□ 2.64
CBX4-201ENST00000269397 IGDCC4Q8TDY8 1250 aa31.53■■■□□ 2.64
CBX4-201ENST00000269397 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.53■■■□□ 2.64
CBX4-201ENST00000269397 POLR2DO15514 142 aaKnown RBP31.52■■■□□ 2.64
CBX4-201ENST00000269397 ATP2B1P20020 1258 aa31.52■■■□□ 2.64
CBX4-201ENST00000269397 MDM2Q00987 491 aaPredicted RBP31.52■■■□□ 2.64
CBX4-201ENST00000269397 ISCA1Q9BUE6 129 aa31.52■■■□□ 2.64
CBX4-201ENST00000269397 TBX2Q13207 712 aaPredicted RBP31.52■■■□□ 2.64
CBX4-201ENST00000269397 TRERF1Q96PN7 1200 aa31.52■■■□□ 2.64
CBX4-201ENST00000269397 IRX2Q9BZI1 471 aaPredicted RBP31.52■■■□□ 2.64
CBX4-201ENST00000269397 MTF1Q14872 753 aa31.52■■■□□ 2.64
CBX4-201ENST00000269397 LY9Q9HBG7 655 aa31.52■■■□□ 2.64
CBX4-201ENST00000269397 SERTAD1Q9UHV2 236 aa31.52■■■□□ 2.64
CBX4-201ENST00000269397 ZNF532Q9HCE3 1301 aa31.51■■■□□ 2.64
CBX4-201ENST00000269397 DDX60Q8IY21 1712 aaKnown RBP31.51■■■□□ 2.64
CBX4-201ENST00000269397 PPP2R3AQ06190 1150 aa31.51■■■□□ 2.63
CBX4-201ENST00000269397 TCIRG1Q13488 830 aa31.51■■■□□ 2.63
CBX4-201ENST00000269397 FCHSD1Q86WN1 690 aa31.51■■■□□ 2.63
CBX4-201ENST00000269397 ZBTB9Q96C00 473 aa31.51■■■□□ 2.63
CBX4-201ENST00000269397 ZSWIM4Q9H7M6 989 aa31.51■■■□□ 2.63
CBX4-201ENST00000269397 SAMSN1Q9NSI8 373 aaKnown RBP31.51■■■□□ 2.63
CBX4-201ENST00000269397 POSTNQ15063 836 aa31.51■■■□□ 2.63
CBX4-201ENST00000269397 LDHAL6AQ6ZMR3 332 aa31.51■■■□□ 2.63
CBX4-201ENST00000269397 CMTR1Q8N1G2 835 aaKnown RBP31.51■■■□□ 2.63
CBX4-201ENST00000269397 MPHOSPH8Q99549 860 aa31.51■■■□□ 2.63
CBX4-201ENST00000269397 TBC1D8O95759 1140 aa31.5■■■□□ 2.63
CBX4-201ENST00000269397 TOB1P50616 345 aaPredicted RBP31.5■■■□□ 2.63
CBX4-201ENST00000269397 MAP3K9P80192 1104 aa31.5■■■□□ 2.63
CBX4-201ENST00000269397 CTDSPL2Q05D32 466 aa31.5■■■□□ 2.63
CBX4-201ENST00000269397 SPECC1LQ69YQ0 1117 aa31.5■■■□□ 2.63
CBX4-201ENST00000269397 ZKSCAN7Q9P0L1 754 aaPredicted RBP31.5■■■□□ 2.63
CBX4-201ENST00000269397 WWC3Q9ULE0 1092 aa31.5■■■□□ 2.63
CBX4-201ENST00000269397 NEK11Q8NG66 645 aa31.5■■■□□ 2.63
CBX4-201ENST00000269397 CC2D1AQ6P1N0 951 aaPredicted RBP31.49■■■□□ 2.63
CBX4-201ENST00000269397 NOSTRINQ8IVI9 506 aa31.49■■■□□ 2.63
CBX4-201ENST00000269397 DHX58Q96C10 678 aa31.49■■■□□ 2.63
CBX4-201ENST00000269397 MED15Q96RN5 788 aa31.49■■■□□ 2.63
CBX4-201ENST00000269397 ST5P78524 1137 aa31.48■■■□□ 2.63
CBX4-201ENST00000269397 SSRP1Q08945 709 aaKnown RBP31.48■■■□□ 2.63
CBX4-201ENST00000269397 SEC31BQ9NQW1 1179 aa31.48■■■□□ 2.63
CBX4-201ENST00000269397 MRFAP1Q9Y605 127 aa31.48■■■□□ 2.63
CBX4-201ENST00000269397 GPTP24298 496 aa31.48■■■□□ 2.63
CBX4-201ENST00000269397 HNRNPH2P55795 449 aaKnown RBP31.48■■■□□ 2.63
CBX4-201ENST00000269397 ZKSCAN3Q9BRR0 538 aa31.48■■■□□ 2.63
CBX4-201ENST00000269397 SLC12A7Q9Y666 1083 aa31.48■■■□□ 2.63
CBX4-201ENST00000269397 IFIT3O14879 490 aaKnown RBP31.47■■■□□ 2.63
CBX4-201ENST00000269397 STX10O60499 249 aa31.47■■■□□ 2.63
CBX4-201ENST00000269397 USP49Q70CQ1 688 aa31.47■■■□□ 2.63
CBX4-201ENST00000269397 GREM2Q9H772 168 aa31.47■■■□□ 2.63
CBX4-201ENST00000269397 ZSWIM5Q9P217 1185 aa31.47■■■□□ 2.63
CBX4-201ENST00000269397 ALS2Q96Q42 1657 aa31.47■■■□□ 2.63
CBX4-201ENST00000269397 MYO5AQ9Y4I1 1855 aaKnown RBP31.47■■■□□ 2.63
CBX4-201ENST00000269397 DIS3L2Q8IYB7 885 aaKnown RBP31.47■■■□□ 2.63
CBX4-201ENST00000269397 ZCRB1Q8TBF4 217 aaKnown RBP31.47■■■□□ 2.63
CBX4-201ENST00000269397 KIFC2Q96AC6 838 aa31.47■■■□□ 2.63
CBX4-201ENST00000269397 RIC1Q4ADV7 1423 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 ZNF18P17022 549 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 TMEM87BQ96K49 555 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 PARD6BQ9BYG5 372 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 MRPL44Q9H9J2 332 aaKnown RBP31.46■■■□□ 2.63
CBX4-201ENST00000269397 CNNM1Q9NRU3 951 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 CALCOCO1Q9P1Z2 691 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 RIPOR2Q9Y4F9 1068 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 MYH7P12883 1935 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 A0A0U1RQJ8 604 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 OAS2P29728 719 aaKnown RBP31.46■■■□□ 2.63
CBX4-201ENST00000269397 NR5A1Q13285 461 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 ATRIPQ8WXE1 791 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 TACC3Q9Y6A5 838 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 COL18A1P39060 1754 aa31.46■■■□□ 2.63
CBX4-201ENST00000269397 PDE6AP16499 860 aa31.45■■■□□ 2.63
CBX4-201ENST00000269397 ITGA6P23229 1130 aa31.45■■■□□ 2.63
CBX4-201ENST00000269397 PHKA1P46020 1223 aa31.45■■■□□ 2.63
CBX4-201ENST00000269397 RRP12Q5JTH9 1297 aaKnown RBP31.45■■■□□ 2.63
CBX4-201ENST00000269397 CCDC12Q8WUD4 166 aaPredicted RBP31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms