RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 CMTR1Q8N1G2 835 aaKnown RBP27.06■■□□□ 1.92
RAB40B-201ENST00000269347 DACT1Q9NYF0 836 aa27.06■■□□□ 1.92
RAB40B-201ENST00000269347 ANAPC4Q9UJX5 808 aa27.06■■□□□ 1.92
RAB40B-201ENST00000269347 POLR3DP05423 398 aaPredicted RBP27.05■■□□□ 1.92
RAB40B-201ENST00000269347 KRT23Q9C075 422 aa27.05■■□□□ 1.92
RAB40B-201ENST00000269347 RPGRQ92834 1020 aaKnown RBP27.05■■□□□ 1.92
RAB40B-201ENST00000269347 CNNM2Q9H8M5 875 aa27.05■■□□□ 1.92
RAB40B-201ENST00000269347 KIAA1551Q9HCM1 1747 aa27.05■■□□□ 1.92
RAB40B-201ENST00000269347 XDHP47989 1333 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 GOLGA8AA7E2F4 631 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 USP17L12C9JPN9 530 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 USP17L21D6R901 530 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 SLC4A8Q2Y0W8 1093 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 TDRD7Q8NHU6 1098 aaKnown RBP27.04■■□□□ 1.92
RAB40B-201ENST00000269347 RCOR1Q9UKL0 485 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 DHX16O60231 1041 aaKnown RBP27.04■■□□□ 1.92
RAB40B-201ENST00000269347 GUCY1A2P33402 732 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 BRIP1Q9BX63 1249 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 GOLPH3LQ9H4A5 285 aa27.04■■□□□ 1.92
RAB40B-201ENST00000269347 SEC23AQ15436 765 aa27.03■■□□□ 1.92
RAB40B-201ENST00000269347 DIXDC1Q155Q3 683 aa27.03■■□□□ 1.92
RAB40B-201ENST00000269347 DCP1AQ9NPI6 582 aaPredicted RBP27.03■■□□□ 1.92
RAB40B-201ENST00000269347 LEMD3Q9Y2U8 911 aa27.02■■□□□ 1.92
RAB40B-201ENST00000269347 KIF3AQ9Y496 699 aa27.02■■□□□ 1.92
RAB40B-201ENST00000269347 SLC12A7Q9Y666 1083 aa27.02■■□□□ 1.92
RAB40B-201ENST00000269347 CLIC4Q9Y696 253 aa27.02■■□□□ 1.92
RAB40B-201ENST00000269347 LAMB1P07942 1786 aa27.02■■□□□ 1.92
RAB40B-201ENST00000269347 OLFM4Q6UX06 510 aa27.02■■□□□ 1.92
RAB40B-201ENST00000269347 COL23A1Q86Y22 540 aaPredicted RBP27.02■■□□□ 1.92
RAB40B-201ENST00000269347 ST5P78524 1137 aa27.01■■□□□ 1.91
RAB40B-201ENST00000269347 KIF23Q02241 960 aaPredicted RBP27.01■■□□□ 1.91
RAB40B-201ENST00000269347 ALG1Q9BT22 464 aa27.01■■□□□ 1.91
RAB40B-201ENST00000269347 POLLQ9UGP5 575 aa27.01■■□□□ 1.91
RAB40B-201ENST00000269347 LTBP1Q14766 1721 aa27.01■■□□□ 1.91
RAB40B-201ENST00000269347 CCDC173Q0VFZ6 552 aa27.01■■□□□ 1.91
RAB40B-201ENST00000269347 WTAPQ15007 396 aa27.01■■□□□ 1.91
RAB40B-201ENST00000269347 PDLIM2Q96JY6 352 aa27.01■■□□□ 1.91
RAB40B-201ENST00000269347 CCDC69A6NI79 296 aa27■■□□□ 1.91
RAB40B-201ENST00000269347 CCDC82Q8N4S0 544 aa27■■□□□ 1.91
RAB40B-201ENST00000269347 CFAP45Q9UL16 551 aa27■■□□□ 1.91
RAB40B-201ENST00000269347 TNKSO95271 1327 aa27■■□□□ 1.91
RAB40B-201ENST00000269347 UFL1O94874 794 aa26.99■■□□□ 1.91
RAB40B-201ENST00000269347 CKAP2LQ8IYA6 745 aa26.99■■□□□ 1.91
RAB40B-201ENST00000269347 AKT1S1Q96B36 256 aa26.99■■□□□ 1.91
RAB40B-201ENST00000269347 NMT2O60551 498 aa26.99■■□□□ 1.91
RAB40B-201ENST00000269347 ENAHQ8N8S7 591 aaPredicted RBP26.99■■□□□ 1.91
RAB40B-201ENST00000269347 BICD2Q8TD16 824 aa26.99■■□□□ 1.91
RAB40B-201ENST00000269347 FGRP09769 529 aa26.98■■□□□ 1.91
RAB40B-201ENST00000269347 KRT40Q6A162 431 aa26.98■■□□□ 1.91
RAB40B-201ENST00000269347 NBPF11Q86T75 865 aa26.98■■□□□ 1.91
RAB40B-201ENST00000269347 NID2Q14112 1375 aa26.98■■□□□ 1.91
RAB40B-201ENST00000269347 SHISA4Q96DD7 197 aa26.98■■□□□ 1.91
RAB40B-201ENST00000269347 SLC26A6Q9BXS9 759 aa26.98■■□□□ 1.91
RAB40B-201ENST00000269347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.98■■□□□ 1.91
RAB40B-201ENST00000269347 CDK5RAP2Q96SN8 1893 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 DLEC1Q9Y238 1755 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 KLRG2A4D1S0 409 aaPredicted RBP26.97■■□□□ 1.91
RAB40B-201ENST00000269347 USP17L8P0C7I0 530 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 RBM6P78332 1123 aaKnown RBP26.97■■□□□ 1.91
RAB40B-201ENST00000269347 ZNF654Q8IZM8 581 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 NUP62CLQ9H1M0 184 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 RNF41Q9H4P4 317 aaPredicted RBP26.97■■□□□ 1.91
RAB40B-201ENST00000269347 CD209Q9NNX6 404 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 GOLGA6L4A6NEF3 574 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 APBA3O96018 575 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 HOXA10P31260 410 aaPredicted RBP26.97■■□□□ 1.91
RAB40B-201ENST00000269347 IARSP41252 1262 aaKnown RBP26.97■■□□□ 1.91
RAB40B-201ENST00000269347 MYSM1Q5VVJ2 828 aa26.97■■□□□ 1.91
RAB40B-201ENST00000269347 SH3RF3Q8TEJ3 882 aaPredicted RBP26.97■■□□□ 1.91
RAB40B-201ENST00000269347 RBM17Q96I25 401 aaKnown RBP26.97■■□□□ 1.91
RAB40B-201ENST00000269347 MKRN1Q9UHC7 482 aaKnown RBP26.97■■□□□ 1.91
RAB40B-201ENST00000269347 DZIP1Q86YF9 867 aaKnown RBP26.96■■□□□ 1.91
RAB40B-201ENST00000269347 CHMP4CQ96CF2 233 aa26.96■■□□□ 1.91
RAB40B-201ENST00000269347 PCDHA7Q9UN72 937 aa26.96■■□□□ 1.91
RAB40B-201ENST00000269347 LRRC37AA6NMS7 1700 aa26.96■■□□□ 1.91
RAB40B-201ENST00000269347 SNW1Q13573 536 aaKnown RBP26.95■■□□□ 1.91
RAB40B-201ENST00000269347 FAM47AQ5JRC9 791 aa26.95■■□□□ 1.91
RAB40B-201ENST00000269347 C15orf52Q6ZUT6 534 aaKnown RBP26.95■■□□□ 1.91
RAB40B-201ENST00000269347 NUP133Q8WUM0 1156 aa26.95■■□□□ 1.91
RAB40B-201ENST00000269347 LETM1O95202 739 aaPredicted RBP26.95■■□□□ 1.9
RAB40B-201ENST00000269347 LINC00301Q8NCQ3 95 aa26.95■■□□□ 1.9
RAB40B-201ENST00000269347 TBC1D16Q8TBP0 767 aa26.95■■□□□ 1.9
RAB40B-201ENST00000269347 ESR2Q92731 530 aa26.95■■□□□ 1.9
RAB40B-201ENST00000269347 CLSTN2Q9H4D0 955 aa26.95■■□□□ 1.9
RAB40B-201ENST00000269347 RTEL1Q9NZ71 1219 aa26.95■■□□□ 1.9
RAB40B-201ENST00000269347 NRXN2Q9P2S2 1712 aa26.95■■□□□ 1.9
RAB40B-201ENST00000269347 MYH6P13533 1939 aa26.95■■□□□ 1.9
RAB40B-201ENST00000269347 ZBTB22O15209 634 aa26.94■■□□□ 1.9
RAB40B-201ENST00000269347 AP5Z1O43299 807 aa26.94■■□□□ 1.9
RAB40B-201ENST00000269347 LDHBP07195 334 aaKnown RBP26.94■■□□□ 1.9
RAB40B-201ENST00000269347 CCAR1Q8IX12 1150 aaKnown RBP26.94■■□□□ 1.9
RAB40B-201ENST00000269347 COL11A2P13942 1736 aaPredicted RBP26.94■■□□□ 1.9
RAB40B-201ENST00000269347 BAZ2BQ9UIF8 2168 aaKnown RBP26.94■■□□□ 1.9
RAB40B-201ENST00000269347 FMNL1O95466 1100 aaPredicted RBP26.94■■□□□ 1.9
RAB40B-201ENST00000269347 IFNAR1P17181 557 aa26.94■■□□□ 1.9
RAB40B-201ENST00000269347 RTN1Q16799 776 aa26.94■■□□□ 1.9
RAB40B-201ENST00000269347 ZNF396Q96N95 335 aaPredicted RBP26.94■■□□□ 1.9
RAB40B-201ENST00000269347 ZSCAN10Q96SZ4 725 aaPredicted RBP26.94■■□□□ 1.9
RAB40B-201ENST00000269347 UBAC1Q9BSL1 405 aa26.94■■□□□ 1.9
RAB40B-201ENST00000269347 CRNKL1Q9BZJ0 848 aaKnown RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 569 ms