RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TROVE2P10155 538 aaKnown RBP eCLIP13.45□□□□□ -0.26
SRRM4-201ENST00000267260 LCA5Q86VQ0 697 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 ZNF710Q8N1W2 664 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 MRPL46Q9H2W6 279 aaKnown RBP13.45□□□□□ -0.26
SRRM4-201ENST00000267260 PAK2Q13177 524 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 SNCBQ16143 134 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
SRRM4-201ENST00000267260 MARCKSP29966 332 aaPredicted RBP13.45□□□□□ -0.26
SRRM4-201ENST00000267260 LRRC23Q53EV4 343 aaPredicted RBP13.45□□□□□ -0.26
SRRM4-201ENST00000267260 NUDT16Q96DE0 195 aaKnown RBP13.45□□□□□ -0.26
SRRM4-201ENST00000267260 RBSNQ9H1K0 784 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 PHBP35232 272 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 PDZD8Q8NEN9 1154 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 INTS4Q96HW7 963 aaKnown RBP13.45□□□□□ -0.26
SRRM4-201ENST00000267260 RPGRIP1Q96KN7 1286 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 CAPN7Q9Y6W3 813 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 GABPAQ06546 454 aa13.45□□□□□ -0.26
SRRM4-201ENST00000267260 PLCD1P51178 756 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 UTP14CQ5TAP6 766 aaKnown RBP13.44□□□□□ -0.26
SRRM4-201ENST00000267260 OGFOD1Q8N543 542 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 ATP6V1E1P36543 226 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 SV2BQ7L1I2 683 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 ZSCAN26Q16670 478 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 VPS41P49754 854 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 VTI1AQ96AJ9 217 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 GLT8D2Q9H1C3 349 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
SRRM4-201ENST00000267260 MYL5Q02045 173 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 RPS6KA2Q15349 733 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 ASIC2Q16515 512 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 KLHL14Q9P2G3 628 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 APOEP02649 317 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 ARHGAP4P98171 946 aa13.44□□□□□ -0.26
SRRM4-201ENST00000267260 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 KLHDC4Q8TBB5 520 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 NAIPQ13075 1403 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 CCT6AP40227 531 aaKnown RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 ZNF804AQ7Z570 1209 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 TACO1Q9BSH4 297 aaKnown RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 C11orf95C9JLR9 678 aaPredicted RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 KMT5BQ4FZB7 885 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 BCRP11274 1271 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 OAS2P29728 719 aaKnown RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 RAPGEF1Q13905 1077 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 EXOC7Q9UPT5 735 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 SLC4A4Q9Y6R1 1079 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 KDM5AP29375 1690 aaKnown RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 HELBQ8NG08 1087 aaPredicted RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 CCDC93Q567U6 631 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 EPS15L1Q9UBC2 864 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
SRRM4-201ENST00000267260 ESRRGP62508 458 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 MYRIPQ8NFW9 859 aa13.43□□□□□ -0.26
SRRM4-201ENST00000267260 SLC12A2P55011 1212 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 SLC9C1Q4G0N8 1177 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 NOC4LQ9BVI4 516 aaKnown RBP13.42□□□□□ -0.26
SRRM4-201ENST00000267260 SCINQ9Y6U3 715 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 KIF1BO60333 1816 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 TTC41PQ6P2S7 1318 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 GON4LQ3T8J9 2241 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 PCF11O94913 1555 aaKnown RBP13.42□□□□□ -0.26
SRRM4-201ENST00000267260 ARHGAP42A6NI28 874 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
SRRM4-201ENST00000267260 TNFAIP3P21580 790 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 DKC1O60832 514 aaKnown RBP eCLIP13.42□□□□□ -0.26
SRRM4-201ENST00000267260 FCHSD1Q86WN1 690 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 HAUS3Q68CZ6 603 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 UBE3BQ7Z3V4 1068 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 ESYT1Q9BSJ8 1104 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 BAG5Q9UL15 447 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 ORC6Q9Y5N6 252 aa13.42□□□□□ -0.26
SRRM4-201ENST00000267260 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 PLCB4Q15147 1175 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 RBM8AQ9Y5S9 174 aaKnown RBP13.41□□□□□ -0.26
SRRM4-201ENST00000267260 MAGEB6P1A0A0J9YX57 407 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 RAP1GDS1P52306 607 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 EVI5O60447 810 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 ATICP31939 592 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 PLS1Q14651 629 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 CCDC124Q96CT7 223 aaKnown RBP13.41□□□□□ -0.26
SRRM4-201ENST00000267260 SPDL1Q96EA4 605 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 SIRT1Q96EB6 747 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 CTTNBP2NLQ9P2B4 639 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 FLOT1O75955 427 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 CYP7A1P22680 504 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
SRRM4-201ENST00000267260 CTNND2Q9UQB3 1225 aa13.41□□□□□ -0.26
SRRM4-201ENST00000267260 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms