RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 IDI2Q9BXS1 227 aa12.01□□□□□ -0.49
VPS41-201ENST00000265745 ZNF341Q9BYN7 854 aa12.01□□□□□ -0.49
VPS41-201ENST00000265745 HMG20BQ9P0W2 317 aa12.01□□□□□ -0.49
VPS41-201ENST00000265745 GAKO14976 1311 aa12.01□□□□□ -0.49
VPS41-201ENST00000265745 ZBTB7BO15156 539 aaPredicted RBP12□□□□□ -0.49
VPS41-201ENST00000265745 CETPP11597 493 aa12□□□□□ -0.49
VPS41-201ENST00000265745 RLBP1P12271 317 aa12□□□□□ -0.49
VPS41-201ENST00000265745 SP3Q02447 781 aa12□□□□□ -0.49
VPS41-201ENST00000265745 SNAPC2Q13487 334 aa12□□□□□ -0.49
VPS41-201ENST00000265745 GORABQ5T7V8 394 aa12□□□□□ -0.49
VPS41-201ENST00000265745 OTOP1Q7RTM1 612 aa12□□□□□ -0.49
VPS41-201ENST00000265745 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
VPS41-201ENST00000265745 SLF2Q8IX21 1173 aa12□□□□□ -0.49
VPS41-201ENST00000265745 FAM43AQ8N2R8 423 aa12□□□□□ -0.49
VPS41-201ENST00000265745 SPATA5Q8NB90 893 aa12□□□□□ -0.49
VPS41-201ENST00000265745 ZNF384Q8TF68 577 aa12□□□□□ -0.49
VPS41-201ENST00000265745 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
VPS41-201ENST00000265745 TRIM17Q9Y577 477 aa12□□□□□ -0.49
VPS41-201ENST00000265745 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
VPS41-201ENST00000265745 GPR75-ASB3A0A0A6YYF3 556 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 BTBD19C9JJ37 291 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 ENTPD3O75355 529 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 ARID4AP29374 1257 aaPredicted RBP11.99□□□□□ -0.49
VPS41-201ENST00000265745 RGS3P49796 1198 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 MAP3K10Q02779 954 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 MECOMQ03112 1051 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 PPATQ06203 517 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 PPIL2Q13356 520 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 PI16Q6UXB8 463 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 FTSJ3Q8IY81 847 aaKnown RBP11.99□□□□□ -0.49
VPS41-201ENST00000265745 ERO1AQ96HE7 468 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 ZFYVE28Q9HCC9 887 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 GPR108Q9NPR9 543 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 WDR70Q9NW82 654 aa11.99□□□□□ -0.49
VPS41-201ENST00000265745 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
VPS41-201ENST00000265745 ZBED9Q6R2W3 1325 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 PHF20L1A8MW92 1017 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 WDHD1O75717 1129 aaPredicted RBP11.98□□□□□ -0.49
VPS41-201ENST00000265745 BTDP43251 543 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 CAP1Q01518 475 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 TAF1CQ15572 869 aaPredicted RBP11.98□□□□□ -0.49
VPS41-201ENST00000265745 NOL9Q5SY16 702 aaKnown RBP11.98□□□□□ -0.49
VPS41-201ENST00000265745 TBC1D9Q6ZT07 1266 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 CD99L2Q8TCZ2 262 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 EFCC1Q9HA90 598 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 ZCCHC17Q9NP64 241 aaKnown RBP11.98□□□□□ -0.49
VPS41-201ENST00000265745 KCNH4Q9UQ05 1017 aa11.98□□□□□ -0.49
VPS41-201ENST00000265745 NOP58Q9Y2X3 529 aaKnown RBP11.98□□□□□ -0.49
VPS41-201ENST00000265745 MROH7-TTC4A0A0A0MT08 1334 aa11.97□□□□□ -0.49
VPS41-201ENST00000265745 TLR2O60603 784 aa11.97□□□□□ -0.49
VPS41-201ENST00000265745 SURF6O75683 361 aaKnown RBP11.97□□□□□ -0.49
VPS41-201ENST00000265745 UQCRFS1P1P0C7P4 283 aa11.97□□□□□ -0.49
VPS41-201ENST00000265745 MCAMP43121 646 aa11.97□□□□□ -0.49
VPS41-201ENST00000265745 RHBDL3P58872 404 aa11.97□□□□□ -0.49
VPS41-201ENST00000265745 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
VPS41-201ENST00000265745 NSUN4Q96CB9 384 aaKnown RBP11.97□□□□□ -0.49
VPS41-201ENST00000265745 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
VPS41-201ENST00000265745 PTPN22Q9Y2R2 807 aa11.97□□□□□ -0.49
VPS41-201ENST00000265745 RFX7Q2KHR2 1363 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 ATRNL1Q5VV63 1379 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.49
VPS41-201ENST00000265745 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.49
VPS41-201ENST00000265745 LDHCP07864 332 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 GSTO1P78417 241 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 TNNI3KQ59H18 835 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 ZSCAN29Q8IWY8 852 aaPredicted RBP11.96□□□□□ -0.49
VPS41-201ENST00000265745 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 DBNDD2Q9BQY9 259 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 RAI14Q9P0K7 980 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 FPGT-TNNI3KV9GXZ4 949 aa11.96□□□□□ -0.49
VPS41-201ENST00000265745 CXCL11O14625 94 aa11.95□□□□□ -0.5
VPS41-201ENST00000265745 OS9Q13438 667 aaPredicted RBP11.95□□□□□ -0.5
VPS41-201ENST00000265745 PICALMQ13492 652 aa11.95□□□□□ -0.5
VPS41-201ENST00000265745 MOGSQ13724 837 aa11.95□□□□□ -0.5
VPS41-201ENST00000265745 ARHGEF6Q15052 776 aa11.95□□□□□ -0.5
VPS41-201ENST00000265745 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
VPS41-201ENST00000265745 ANKRD23Q86SG2 305 aa11.95□□□□□ -0.5
VPS41-201ENST00000265745 ZNF512BQ96KM6 892 aaPredicted RBP11.95□□□□□ -0.5
VPS41-201ENST00000265745 LRP2BPQ9P2M1 347 aa11.95□□□□□ -0.5
VPS41-201ENST00000265745 ZHX2Q9Y6X8 837 aa11.95□□□□□ -0.5
VPS41-201ENST00000265745 PDHXO00330 501 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 CTNND1O60716 968 aaKnown RBP11.94□□□□□ -0.5
VPS41-201ENST00000265745 SLURP2P0DP57 97 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 PTPRAP18433 802 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 PSEN1P49768 467 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 TTC39AQ5SRH9 613 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 CEP85Q6P2H3 762 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 C17orf99Q6UX52 265 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 SCYL3Q8IZE3 742 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 PANK1Q8TE04 598 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 ARMC5Q96C12 935 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 PICK1Q9NRD5 415 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 SNRKQ9NRH2 765 aa11.94□□□□□ -0.5
VPS41-201ENST00000265745 ARAP2Q8WZ64 1704 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms