RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 B4E1Z4 1266 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 PPFIA4O75335 1185 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 CYP21A2P08686 494 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 FAM69CQ0P6D2 419 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 RILPL1Q5EBL4 403 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 MMS22LQ6ZRQ5 1243 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 VPS36Q86VN1 386 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 RTEL1Q9NZ71 1219 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 CCZ1BP86790 482 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 CCZ1P86791 482 aaPredicted RBP16.98■□□□□ 0.31
CASC3-201ENST00000264645 MCTP2Q6DN12 878 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 PYM1Q9BRP8 204 aaKnown RBP16.98■□□□□ 0.31
CASC3-201ENST00000264645 ZKSCAN3Q9BRR0 538 aa16.98■□□□□ 0.31
CASC3-201ENST00000264645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.98■□□□□ 0.31
CASC3-201ENST00000264645 RPAP1Q9BWH6 1393 aaPredicted RBP16.97■□□□□ 0.31
CASC3-201ENST00000264645 IL15P40933 162 aaPredicted RBP16.97■□□□□ 0.31
CASC3-201ENST00000264645 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 OSBPL5Q9H0X9 879 aaPredicted RBP16.97■□□□□ 0.31
CASC3-201ENST00000264645 HELLSQ9NRZ9 838 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 EXOC1Q9NV70 894 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 GSTTP1A0A1W2PQM5 241 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 A6NNZ2 444 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 BMP15O95972 392 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 TUBB8Q3ZCM7 444 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 TADA2BQ86TJ2 420 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 UBLCP1Q8WVY7 318 aaPredicted RBP16.97■□□□□ 0.31
CASC3-201ENST00000264645 CDC5LQ99459 802 aaKnown RBP16.97■□□□□ 0.31
CASC3-201ENST00000264645 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
CASC3-201ENST00000264645 IKBKBO14920 756 aa16.97■□□□□ 0.31
CASC3-201ENST00000264645 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
CASC3-201ENST00000264645 SOWAHDA6NJG2 315 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 ADD1P35611 737 aaKnown RBP16.96■□□□□ 0.31
CASC3-201ENST00000264645 ZNF174Q15697 407 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 ANGEL1Q9UNK9 670 aaKnown RBP16.96■□□□□ 0.31
CASC3-201ENST00000264645 MAP3K5Q99683 1374 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 BUB1BO60566 1050 aaPredicted RBP16.96■□□□□ 0.31
CASC3-201ENST00000264645 ARMCX5Q6P1M9 558 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 LINC00301Q8NCQ3 95 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 TADA3O75528 432 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 CASP14P31944 242 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 VSTM4Q8IW00 320 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.31
CASC3-201ENST00000264645 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
CASC3-201ENST00000264645 FLT4P35916 1363 aa16.96■□□□□ 0.3
CASC3-201ENST00000264645 HGSO14964 777 aaPredicted RBP16.95■□□□□ 0.3
CASC3-201ENST00000264645 PDIA3P30101 505 aaKnown RBP16.95■□□□□ 0.3
CASC3-201ENST00000264645 PEX19P40855 299 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 ASIC1P78348 528 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 TCERG1LQ5VWI1 586 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 TLR7Q9NYK1 1049 aaKnown RBP16.95■□□□□ 0.3
CASC3-201ENST00000264645 MICAL1Q8TDZ2 1067 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 YTHDC2Q9H6S0 1430 aaKnown RBP16.95■□□□□ 0.3
CASC3-201ENST00000264645 TRIM14Q14142 442 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 IQCB1Q15051 598 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 ZNF274Q96GC6 653 aaPredicted RBP16.95■□□□□ 0.3
CASC3-201ENST00000264645 SPAG5Q96R06 1193 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 GOLPH3LQ9H4A5 285 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
CASC3-201ENST00000264645 GCKP35557 465 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 CCDC43Q96MW1 224 aaKnown RBP16.94■□□□□ 0.3
CASC3-201ENST00000264645 MCM7P33993 719 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 USP5P45974 858 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 GUCY2FP51841 1108 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 PPP2R5AQ15172 486 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 E2F5Q15329 346 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 SPTY2D1Q68D10 685 aaPredicted RBP16.94■□□□□ 0.3
CASC3-201ENST00000264645 UBA5Q9GZZ9 404 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 VEZTQ9HBM0 779 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 GPTP24298 496 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 KCNH5Q8NCM2 988 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 ACRBPQ8NEB7 543 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 TMEM232C9JQI7 657 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 VIMP08670 466 aaKnown RBP16.94■□□□□ 0.3
CASC3-201ENST00000264645 KIAA0753Q2KHM9 967 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 MEX3CQ5U5Q3 659 aaKnown RBP16.94■□□□□ 0.3
CASC3-201ENST00000264645 LRCH2Q5VUJ6 765 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 IFT20Q8IY31 132 aa16.94■□□□□ 0.3
CASC3-201ENST00000264645 COBLO75128 1261 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 KIF4AO95239 1232 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 RPSAP08865 295 aaKnown RBP16.93■□□□□ 0.3
CASC3-201ENST00000264645 AMPD3Q01432 767 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 IFT88Q13099 833 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 OR8K1Q8NGG5 319 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 WDR24Q96S15 920 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 SAMD15Q9P1V8 674 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 TRPM1Q7Z4N2 1603 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 PLA2G4AP47712 749 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 ATP2B2Q01814 1243 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 PAK1Q13153 545 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 TTF1Q15361 905 aaPredicted RBP16.93■□□□□ 0.3
CASC3-201ENST00000264645 NCAPH2Q6IBW4 605 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 CCDC155Q8N6L0 562 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 RPGRIP1Q96KN7 1286 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 NSRP1Q9H0G5 558 aaKnown RBP16.93■□□□□ 0.3
CASC3-201ENST00000264645 ATP5JP18859 108 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 ERCC3P19447 782 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 TNNC1P63316 161 aa16.93■□□□□ 0.3
CASC3-201ENST00000264645 TOGARAM2Q6ZUX3 1019 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms