RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 PLCG2P16885 1265 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 USP5P45974 858 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 ANTXR2P58335 489 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 TGFB2P61812 414 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 KIAA2012Q0VF49 1180 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 AOC3Q16853 763 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 RRP12Q5JTH9 1297 aaKnown RBP9.79□□□□□ -0.84
COPS4-201ENST00000264389 FBXL16Q8N461 479 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 TNPO1Q92973 898 aaKnown RBP9.79□□□□□ -0.84
COPS4-201ENST00000264389 GTF3C6Q969F1 213 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 GBP4Q96PP9 640 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 DCP1AQ9NPI6 582 aaPredicted RBP9.79□□□□□ -0.84
COPS4-201ENST00000264389 ANAPC4Q9UJX5 808 aa9.79□□□□□ -0.84
COPS4-201ENST00000264389 NAP1L2Q9ULW6 460 aaPredicted RBP9.79□□□□□ -0.84
COPS4-201ENST00000264389 GAKO14976 1311 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 PPIP5K2O43314 1243 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 GJB2P29033 226 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 SOGA3Q5TF21 947 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 CTR9Q6PD62 1173 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 AMOTL1Q8IY63 956 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 RTKN2Q8IZC4 609 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 STK11IPQ8N1F8 1099 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 KLHL34Q8N239 644 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 SH3RF3Q8TEJ3 882 aaPredicted RBP9.78□□□□□ -0.84
COPS4-201ENST00000264389 TMEM87BQ96K49 555 aa9.78□□□□□ -0.84
COPS4-201ENST00000264389 GPR75-ASB3A0A0A6YYF3 556 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
COPS4-201ENST00000264389 F8W031 263 aaPredicted RBP9.77□□□□□ -0.85
COPS4-201ENST00000264389 PFKFB2O60825 505 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 KDM4AO75164 1064 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 SLC3A2P08195 630 aaKnown RBP9.77□□□□□ -0.85
COPS4-201ENST00000264389 KCNA3P22001 575 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 PPP4CP60510 307 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 PKP1Q13835 747 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 CYB5R4Q7L1T6 521 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 TEX11Q8IYF3 940 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 CERS5Q8N5B7 392 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 PIM2Q9P1W9 311 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 PPP1R1BQ9UD71 204 aaPredicted RBP9.77□□□□□ -0.85
COPS4-201ENST00000264389 ANGEL1Q9UNK9 670 aaKnown RBP9.77□□□□□ -0.85
COPS4-201ENST00000264389 TTF2Q9UNY4 1162 aaKnown RBP9.77□□□□□ -0.85
COPS4-201ENST00000264389 ROBO3Q96MS0 1386 aa9.77□□□□□ -0.85
COPS4-201ENST00000264389 CYP2D7A0A087X1C5 515 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 KLF18A0A0U1RQI7 1052 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 GOLGA8BA8MQT2 603 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 USP17L12C9JPN9 530 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 USP17L21D6R901 530 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 SH2B2O14492 632 aaPredicted RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 PCP11498 1178 aaKnown RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 FKBP1AP62942 108 aaKnown RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 SCRN1Q12765 414 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 SART3Q15020 963 aaKnown RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 ESR2Q92731 530 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 CHMP4CQ96CF2 233 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 ZNF274Q96GC6 653 aaPredicted RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 PSMD1Q99460 953 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 MCM9Q9NXL9 1143 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 TACC3Q9Y6A5 838 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 COL4A5P29400 1685 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 SIPA1L1O43166 1804 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 WDR33Q9C0J8 1336 aaKnown RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 DICER1Q9UPY3 1922 aaKnown RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 ERICH2A1L162 156 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 BRD1O95696 1058 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 EVCP57679 992 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 TMEM67Q5HYA8 995 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 STRIP1Q5VSL9 837 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 NFXL1Q6ZNB6 911 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 MAPKAPK5Q8IW41 473 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 TGFBRAP1Q8WUH2 860 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 TEKT1Q969V4 418 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 MXD3Q9BW11 206 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 INCENPQ9NQS7 918 aa9.76□□□□□ -0.85
COPS4-201ENST00000264389 GPHNQ9NQX3 736 aaPredicted RBP9.76□□□□□ -0.85
COPS4-201ENST00000264389 FLT1P17948 1338 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 USP17L3A6NCW0 530 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 USP17L4A6NCW7 530 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 IFIT3O14879 490 aaKnown RBP9.75□□□□□ -0.85
COPS4-201ENST00000264389 STX6O43752 255 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 USP17L8P0C7I0 530 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 CYP2D6P10635 497 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 PDIA3P30101 505 aaKnown RBP9.75□□□□□ -0.85
COPS4-201ENST00000264389 MCM4P33991 863 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 SCNN1DP51172 638 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 CCT2P78371 535 aaKnown RBP9.75□□□□□ -0.85
COPS4-201ENST00000264389 PDE4BQ07343 736 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 DALRD3Q5D0E6 543 aaKnown RBP9.75□□□□□ -0.85
COPS4-201ENST00000264389 DACT2Q5SW24 774 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 FOXD4L5Q5VV16 416 aaPredicted RBP9.75□□□□□ -0.85
COPS4-201ENST00000264389 USP17L1Q7RTZ2 530 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 IFNLR1Q8IU57 520 aaPredicted RBP9.75□□□□□ -0.85
COPS4-201ENST00000264389 NKX2-3Q8TAU0 364 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 FOXD4L4Q8WXT5 416 aaPredicted RBP9.75□□□□□ -0.85
COPS4-201ENST00000264389 SGIP1Q9BQI5 828 aa9.75□□□□□ -0.85
COPS4-201ENST00000264389 LLPHQ9BRT6 129 aaKnown RBP9.75□□□□□ -0.85
COPS4-201ENST00000264389 UBAC1Q9BSL1 405 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms