RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ADGRG1Q9Y653 693 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 TMEM94Q12767 1356 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 ZNF213O14771 459 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 MCM3P25205 808 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 MDM2Q00987 491 aaPredicted RBP14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 POSTNQ15063 836 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 PPM1EQ8WY54 764 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 GPHNQ9NQX3 736 aaPredicted RBP14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 MYO1AQ9UBC5 1043 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 MAN1B1Q9UKM7 699 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 A0A0G2JLW4 131 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 CTAGE15A4D2H0 777 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 M0R2C6 588 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 CTAGE8P0CG41 777 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 TTC31Q49AM3 519 aaPredicted RBP14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 CTAGE6Q86UF2 777 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 FOXP4Q8IVH2 680 aaPredicted RBP14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 CTAGE4Q8IX94 777 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 CTAGE1Q96RT6 745 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 FAM107BQ9H098 131 aa14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 CCDC9Q9Y3X0 531 aaKnown RBP14.13□□□□□ -0.15
CHMP2B-201ENST00000263780 PXDNQ92626 1479 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 SPEF2Q9C093 1822 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 CPDO75976 1380 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 A0A1B0GTH6 734 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 METAP2P50579 478 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 PDE4BQ07343 736 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 CTCFLQ8NI51 663 aaPredicted RBP14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 OSBP2Q969R2 916 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 DESI2Q9BSY9 194 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 MRPL44Q9H9J2 332 aaKnown RBP14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 PUF60Q9UHX1 559 aaKnown RBP14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 FGAP02671 866 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 GTF2A1P52655 376 aaPredicted RBP14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 WASHC4Q2M389 1173 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 FILIP1LQ4L180 1135 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 ICE2Q659A1 982 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 RASGRP2Q7LDG7 609 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 ATG9AQ7Z3C6 839 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 ZSWIM4Q9H7M6 989 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 VIPAS39Q9H9C1 493 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 ABCB6Q9NP58 842 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 LZTFL1Q9NQ48 299 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 FAN1Q9Y2M0 1017 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 SLIT3O75094 1523 aa14.12□□□□□ -0.15
CHMP2B-201ENST00000263780 SNRPA1P09661 255 aaKnown RBP14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 SARSP49591 514 aaKnown RBP14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 TIMM10P62072 90 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 MORC3Q14149 939 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 ZNF569Q5MCW4 686 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 WASF1Q92558 559 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 GJB4Q9NTQ9 266 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 ANGEL1Q9UNK9 670 aaKnown RBP14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 CIAO1O76071 339 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 BMP6P22004 513 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 PLCD1P51178 756 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 CASP7P55210 303 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 HAND2P61296 217 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 CASP8Q14790 479 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 CNGA4Q8IV77 575 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 CCDC102AQ96A19 550 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 CLIC6Q96NY7 704 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 NAPGQ99747 312 aaPredicted RBP14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 SLC52A2Q9HAB3 445 aa14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 PHRF1Q9P1Y6 1649 aaKnown RBP14.11□□□□□ -0.15
CHMP2B-201ENST00000263780 SEMA3EO15041 775 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 ANTXR2P58335 489 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 SAFBQ15424 915 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 MAP9Q49MG5 647 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 ZNF579Q8NAF0 562 aaKnown RBP14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 PLBD2Q8NHP8 589 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 APPBP2Q92624 585 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 EYA2O00167 538 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 CDC27P30260 824 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 IARSP41252 1262 aaKnown RBP14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 IGSF22Q8N9C0 903 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 PNKPQ96T60 521 aa14.1□□□□□ -0.15
CHMP2B-201ENST00000263780 SOWAHDA6NJG2 315 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 EIF3CLB5ME19 914 aaKnown RBP14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 H7C1W4 665 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 CORO7P57737 925 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 FOXO4P98177 505 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 FMR1Q06787 632 aaKnown RBP eCLIP14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 WDR93Q6P2C0 686 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 TMTC1Q8IUR5 882 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 EIF3CQ99613 913 aaKnown RBP14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 ARHGAP23Q9P227 1491 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 PTPN21Q16825 1174 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 SPATA1Q5VX52 437 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 CEP131Q9UPN4 1083 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 AKAP2Q9Y2D5 859 aa14.09□□□□□ -0.15
CHMP2B-201ENST00000263780 SIPA1L3O60292 1781 aaPredicted RBP14.08□□□□□ -0.15
CHMP2B-201ENST00000263780 PPFIA4O75335 1185 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 FKBP4Q02790 459 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 LRP10Q7Z4F1 713 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
CHMP2B-201ENST00000263780 CCDC148Q8NFR7 591 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms