RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 DIS3L2Q8IYB7 885 aaKnown RBP14.52□□□□□ -0.08
LIG1-201ENST00000263274 ZMYM6O95789 1325 aa14.52□□□□□ -0.09
LIG1-201ENST00000263274 ADD2P35612 726 aa14.52□□□□□ -0.09
LIG1-201ENST00000263274 NCAPHQ15003 741 aa14.52□□□□□ -0.09
LIG1-201ENST00000263274 DESI2Q9BSY9 194 aa14.52□□□□□ -0.09
LIG1-201ENST00000263274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.52□□□□□ -0.094e-7■■□□□ 14.5
LIG1-201ENST00000263274 CRYBG1Q9Y4K1 1723 aa14.52□□□□□ -0.09
LIG1-201ENST00000263274 COBLO75128 1261 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 ETF1P62495 437 aaKnown RBP14.51□□□□□ -0.09
LIG1-201ENST00000263274 NR5A1Q13285 461 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 MFSD6Q6ZSS7 791 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 STAMQ92783 540 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 ZSWIM5Q9P217 1185 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 LRP2BPQ9P2M1 347 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 HOOK1Q9UJC3 728 aaKnown RBP14.51□□□□□ -0.09
LIG1-201ENST00000263274 NEDD4P46934 1319 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 GUCY1A2P33402 732 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 GRIN1Q05586 938 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 SERTAD1Q9UHV2 236 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 NFE2L3Q9Y4A8 694 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 N4BP2Q86UW6 1770 aaPredicted RBP14.51□□□□□ -0.09
LIG1-201ENST00000263274 PES1O00541 588 aaKnown RBP14.51□□□□□ -0.09
LIG1-201ENST00000263274 SYCP1Q15431 976 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 TMCO3Q6UWJ1 677 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 CABP5Q9NP86 173 aa14.51□□□□□ -0.09
LIG1-201ENST00000263274 SH2B2O14492 632 aaPredicted RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 SART3Q15020 963 aaKnown RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 KRI1Q8N9T8 703 aaKnown RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 ZBTB38Q8NAP3 1195 aaPredicted RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 ISCA1Q9BUE6 129 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 ARGLU1Q9NWB6 273 aaPredicted RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 ERVV-2B6SEH9 535 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 PCCAP05165 728 aaPredicted RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 PDE4BQ07343 736 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 MAP3K12Q12852 859 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 TTF1Q15361 905 aaPredicted RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 KRBA2Q6ZNG9 492 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 TTLL11Q8NHH1 800 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 SMARCE1Q969G3 411 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 DHX58Q96C10 678 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 MTMR7Q9Y216 660 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 SLC4A4Q9Y6R1 1079 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 SEC31AO94979 1220 aaKnown RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 CASP1P29466 404 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 WTAPQ15007 396 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 RTN1Q16799 776 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 SLC4A8Q2Y0W8 1093 aa14.5□□□□□ -0.09
LIG1-201ENST00000263274 METTL16Q86W50 562 aaKnown RBP14.5□□□□□ -0.09
LIG1-201ENST00000263274 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.5□□□□□ -0.09
LIG1-201ENST00000263274 CASQ1P31415 396 aa14.49□□□□□ -0.09
LIG1-201ENST00000263274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.49□□□□□ -0.09
LIG1-201ENST00000263274 FOXP4Q8IVH2 680 aaPredicted RBP14.49□□□□□ -0.09
LIG1-201ENST00000263274 UBAC1Q9BSL1 405 aa14.49□□□□□ -0.09
LIG1-201ENST00000263274 LZTFL1Q9NQ48 299 aa14.49□□□□□ -0.09
LIG1-201ENST00000263274 ATG3Q9NT62 314 aa14.49□□□□□ -0.09
LIG1-201ENST00000263274 RGPD5Q99666 1765 aa14.49□□□□□ -0.09
LIG1-201ENST00000263274 RANBP6O60518 1105 aaKnown RBP14.49□□□□□ -0.09
LIG1-201ENST00000263274 CLCN6P51797 869 aa14.49□□□□□ -0.09
LIG1-201ENST00000263274 BMS1Q14692 1282 aaKnown RBP14.49□□□□□ -0.09
LIG1-201ENST00000263274 IFNL3Q8IZI9 196 aa14.49□□□□□ -0.09
LIG1-201ENST00000263274 BAG1Q99933 345 aaPredicted RBP14.49□□□□□ -0.09
LIG1-201ENST00000263274 PSDA5PKW4 1024 aaPredicted RBP14.48□□□□□ -0.09
LIG1-201ENST00000263274 CCP110O43303 1012 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 ZSCAN12O43309 604 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 CCDC34Q96HJ3 373 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 NBPF3Q9H094 633 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 SAMSN1Q9NSI8 373 aaKnown RBP14.48□□□□□ -0.09
LIG1-201ENST00000263274 RIPOR2Q9Y4F9 1068 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 CUTAO60888 179 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 PRDM1O75626 825 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 PDE8BO95263 885 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 CTSWP56202 376 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 EVCP57679 992 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 USP49Q70CQ1 688 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 NOL10Q9BSC4 688 aaKnown RBP14.48□□□□□ -0.09
LIG1-201ENST00000263274 NACAP1Q9BZK3 213 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 PCDHB6Q9Y5E3 794 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 MORC2Q9Y6X9 1032 aaPredicted RBP14.48□□□□□ -0.09
LIG1-201ENST00000263274 UBN2Q6ZU65 1347 aa14.48□□□□□ -0.09
LIG1-201ENST00000263274 POSTNQ15063 836 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 NOSTRINQ8IVI9 506 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 CCDC12Q8WUD4 166 aaPredicted RBP14.47□□□□□ -0.09
LIG1-201ENST00000263274 TMEM87BQ96K49 555 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 RAI14Q9P0K7 980 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 IKBKBO14920 756 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 NLRP10Q86W26 655 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.47□□□□□ -0.09
LIG1-201ENST00000263274 PPP2R2CQ9Y2T4 447 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 AFDNP55196 1824 aaKnown RBP14.47□□□□□ -0.09
LIG1-201ENST00000263274 BCAMP50895 628 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 SDR42E1Q8WUS8 393 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 PIGBQ92521 554 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 STRBPQ96SI9 672 aaKnown RBP14.47□□□□□ -0.09
LIG1-201ENST00000263274 ZBTB1Q9Y2K1 713 aa14.47□□□□□ -0.09
LIG1-201ENST00000263274 C5P01031 1676 aa14.46□□□□□ -0.09
LIG1-201ENST00000263274 CHD2O14647 1828 aaKnown RBP14.46□□□□□ -0.09
LIG1-201ENST00000263274 TOM1O60784 492 aa14.46□□□□□ -0.09
LIG1-201ENST00000263274 PPP6R2O75170 966 aa14.46□□□□□ -0.09
LIG1-201ENST00000263274 GIGYF2Q6Y7W6 1299 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms