RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 OLFM4Q6UX06 510 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 FBXL16Q8N461 479 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 BICD2Q8TD16 824 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 MYH13Q9UKX3 1938 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 RGL2O15211 777 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 DIXDC1Q155Q3 683 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 MSL1Q68DK7 614 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 NUP133Q8WUM0 1156 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 CACNA1SQ13698 1873 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 UFL1O94874 794 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 APBA3O96018 575 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 ST5P78524 1137 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 CKAP2LQ8IYA6 745 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 SCAND2PQ9GZW5 306 aaPredicted RBP15.84■□□□□ 0.13
VMP1-201ENST00000262291 DACT1Q9NYF0 836 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 ZMYM6O95789 1325 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 CCDC69A6NI79 296 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 KIF28PB7ZC32 967 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 USP17L12C9JPN9 530 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 USP17L21D6R901 530 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 STAG1Q8WVM7 1258 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 ANP32BQ92688 251 aaKnown RBP15.84■□□□□ 0.13
VMP1-201ENST00000262291 FAM217BQ9NTX9 383 aaPredicted RBP15.84■□□□□ 0.13
VMP1-201ENST00000262291 SLC12A7Q9Y666 1083 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
VMP1-201ENST00000262291 RANBP6O60518 1105 aaKnown RBP15.83■□□□□ 0.13
VMP1-201ENST00000262291 ADRA2BP18089 450 aa15.83■□□□□ 0.13
VMP1-201ENST00000262291 DZIP1Q86YF9 867 aaKnown RBP15.83■□□□□ 0.13
VMP1-201ENST00000262291 ZSCAN16Q9H4T2 348 aaPredicted RBP15.83■□□□□ 0.13
VMP1-201ENST00000262291 KIF3AQ9Y496 699 aa15.83■□□□□ 0.13
VMP1-201ENST00000262291 DHX16O60231 1041 aaKnown RBP15.83■□□□□ 0.12
VMP1-201ENST00000262291 NR1I2O75469 434 aa15.83■□□□□ 0.12
VMP1-201ENST00000262291 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.12
VMP1-201ENST00000262291 MPNDQ8N594 471 aa15.83■□□□□ 0.12
VMP1-201ENST00000262291 TMEM87BQ96K49 555 aa15.83■□□□□ 0.12
VMP1-201ENST00000262291 KRT23Q9C075 422 aa15.83■□□□□ 0.12
VMP1-201ENST00000262291 WTAPQ15007 396 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 CTR9Q6PD62 1173 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 ALG1Q9BT22 464 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 SLC26A6Q9BXS9 759 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 WDR19Q8NEZ3 1342 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 IRS2Q9Y4H2 1338 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 CHD4Q14839 1912 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 POLRMTO00411 1230 aaKnown RBP15.82■□□□□ 0.12
VMP1-201ENST00000262291 NMT2O60551 498 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 PPP1R9BQ96SB3 815 aa15.82■□□□□ 0.12
VMP1-201ENST00000262291 GUCY1A2P33402 732 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 FAM47AQ5JRC9 791 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 SMAP1Q8IYB5 467 aaPredicted RBP15.81■□□□□ 0.12
VMP1-201ENST00000262291 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 CLIC4Q9Y696 253 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 XDHP47989 1333 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 hCG_1642624A0A1W2PR95 340 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 PDIA4P13667 645 aaKnown RBP15.81■□□□□ 0.12
VMP1-201ENST00000262291 COL23A1Q86Y22 540 aaPredicted RBP15.81■□□□□ 0.12
VMP1-201ENST00000262291 FBXO18Q8NFZ0 1043 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 UBAC1Q9BSL1 405 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 C6orf229H3BNL8 230 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 RIMBP2O15034 1052 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 USP17L8P0C7I0 530 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 MAP7D2Q96T17 732 aa15.81■□□□□ 0.12
VMP1-201ENST00000262291 ELP1O95163 1332 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 CFAP45Q9UL16 551 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 TNKSO95271 1327 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 ERICH2A1L162 156 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 SEMA3EO15041 775 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
VMP1-201ENST00000262291 ME1P48163 572 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 NTRK3Q16288 839 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 RBM17Q96I25 401 aaKnown RBP15.8■□□□□ 0.12
VMP1-201ENST00000262291 NUP62CLQ9H1M0 184 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 GOLPH3LQ9H4A5 285 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 DCP1AQ9NPI6 582 aaPredicted RBP15.8■□□□□ 0.12
VMP1-201ENST00000262291 POLLQ9UGP5 575 aa15.8■□□□□ 0.12
VMP1-201ENST00000262291 MYH2Q9UKX2 1941 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 A0A087WWV3 80 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 LDHBP07195 334 aaKnown RBP15.79■□□□□ 0.12
VMP1-201ENST00000262291 PLCB2Q00722 1185 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 SYNE3Q6ZMZ3 975 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 SGMS1Q86VZ5 419 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 SH3RF3Q8TEJ3 882 aaPredicted RBP15.79■□□□□ 0.12
VMP1-201ENST00000262291 ERCC4Q92889 916 aaPredicted RBP15.79■□□□□ 0.12
VMP1-201ENST00000262291 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 LEMD3Q9Y2U8 911 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 PDE4CQ08493 712 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 CRY2Q49AN0 593 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 KRT40Q6A162 431 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 MCM9Q9NXL9 1143 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 GGA1Q9UJY5 639 aa15.79■□□□□ 0.12
VMP1-201ENST00000262291 LIFRP42702 1097 aa15.78■□□□□ 0.12
VMP1-201ENST00000262291 RBM6P78332 1123 aaKnown RBP15.78■□□□□ 0.12
VMP1-201ENST00000262291 SART3Q15020 963 aaKnown RBP15.78■□□□□ 0.12
VMP1-201ENST00000262291 RTN1Q16799 776 aa15.78■□□□□ 0.12
VMP1-201ENST00000262291 CCAR1Q8IX12 1150 aaKnown RBP15.78■□□□□ 0.12
VMP1-201ENST00000262291 ZNF654Q8IZM8 581 aa15.78■□□□□ 0.12
VMP1-201ENST00000262291 CRNKL1Q9BZJ0 848 aaKnown RBP15.78■□□□□ 0.12
VMP1-201ENST00000262291 RNF41Q9H4P4 317 aaPredicted RBP15.78■□□□□ 0.12
VMP1-201ENST00000262291 SAP30BPQ9UHR5 308 aaKnown RBP15.78■□□□□ 0.12
VMP1-201ENST00000262291 KCNJ14Q9UNX9 436 aa15.78■□□□□ 0.12
VMP1-201ENST00000262291 ZNF804AQ7Z570 1209 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms