RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CYP2D6P10635 497 aa32.76■■■□□ 2.83
SMARCD3-201ENST00000262188 PLCG2P16885 1265 aa32.76■■■□□ 2.83
SMARCD3-201ENST00000262188 FLT1P17948 1338 aa32.75■■■□□ 2.83
SMARCD3-201ENST00000262188 H7C1D1 291 aa32.75■■■□□ 2.83
SMARCD3-201ENST00000262188 ZFPM1Q8IX07 1006 aa32.75■■■□□ 2.83
SMARCD3-201ENST00000262188 MKRN1Q9UHC7 482 aaKnown RBP32.75■■■□□ 2.83
SMARCD3-201ENST00000262188 ECM29Q5VYK3 1845 aa32.75■■■□□ 2.83
SMARCD3-201ENST00000262188 GLTPD2A6NH11 291 aa32.74■■■□□ 2.83
SMARCD3-201ENST00000262188 CYP21A2P08686 494 aa32.74■■■□□ 2.83
SMARCD3-201ENST00000262188 TCP10Q12799 353 aa32.74■■■□□ 2.83
SMARCD3-201ENST00000262188 KIF4BQ2VIQ3 1234 aa32.74■■■□□ 2.83
SMARCD3-201ENST00000262188 MTMR14Q8NCE2 650 aa32.74■■■□□ 2.83
SMARCD3-201ENST00000262188 NACAP1Q9BZK3 213 aa32.73■■■□□ 2.83
SMARCD3-201ENST00000262188 MCM9Q9NXL9 1143 aa32.73■■■□□ 2.83
SMARCD3-201ENST00000262188 ZNF70Q9UC06 446 aaPredicted RBP32.73■■■□□ 2.83
SMARCD3-201ENST00000262188 USP17L12C9JPN9 530 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 USP17L21D6R901 530 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 COL9A3Q14050 684 aaPredicted RBP32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 VEZTQ9HBM0 779 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 ATP8A2Q9NTI2 1148 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 FAM198AQ9UFP1 575 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 MINDY4BA8MYZ0 360 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 TCP10L2B9ZVM9 353 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 RBM25P49756 843 aaKnown RBP32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 HIRAP54198 1017 aaPredicted RBP32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 ALX1Q15699 326 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 CTR9Q6PD62 1173 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 NBPF3Q9H094 633 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 INCENPQ9NQS7 918 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 SNX14Q9Y5W7 946 aa32.72■■■□□ 2.83
SMARCD3-201ENST00000262188 ZC3H4Q9UPT8 1303 aaKnown RBP32.71■■■□□ 2.83
SMARCD3-201ENST00000262188 CTDSPL2Q05D32 466 aa32.71■■■□□ 2.83
SMARCD3-201ENST00000262188 NAV1Q8NEY1 1877 aa32.71■■■□□ 2.83
SMARCD3-201ENST00000262188 SPDYE2Q495Y8 402 aa32.7■■■□□ 2.83
SMARCD3-201ENST00000262188 KIF2CQ99661 725 aa32.7■■■□□ 2.83
SMARCD3-201ENST00000262188 FOCADQ5VW36 1801 aa32.7■■■□□ 2.83
SMARCD3-201ENST00000262188 LMOD1P29536 600 aaPredicted RBP32.7■■■□□ 2.82
SMARCD3-201ENST00000262188 CERS3Q8IU89 383 aa32.7■■■□□ 2.82
SMARCD3-201ENST00000262188 TACC3Q9Y6A5 838 aa32.7■■■□□ 2.82
SMARCD3-201ENST00000262188 MCCP23508 829 aa32.69■■■□□ 2.82
SMARCD3-201ENST00000262188 ADCK5Q3MIX3 580 aa32.69■■■□□ 2.82
SMARCD3-201ENST00000262188 STOX1Q6ZVD7 989 aa32.69■■■□□ 2.82
SMARCD3-201ENST00000262188 CTNNA3Q9UI47 895 aa32.69■■■□□ 2.82
SMARCD3-201ENST00000262188 EPB41L2O43491 1005 aaKnown RBP32.68■■■□□ 2.82
SMARCD3-201ENST00000262188 SLURP2P0DP57 97 aa32.68■■■□□ 2.82
SMARCD3-201ENST00000262188 TBC1D10CQ8IV04 446 aa32.68■■■□□ 2.82
SMARCD3-201ENST00000262188 L3MBTL3Q96JM7 780 aaPredicted RBP32.68■■■□□ 2.82
SMARCD3-201ENST00000262188 RPAP1Q9BWH6 1393 aaPredicted RBP32.68■■■□□ 2.82
SMARCD3-201ENST00000262188 ZNF213O14771 459 aa32.67■■■□□ 2.82
SMARCD3-201ENST00000262188 POTECB2RU33 542 aa32.67■■■□□ 2.82
SMARCD3-201ENST00000262188 PLCD1P51178 756 aa32.67■■■□□ 2.82
SMARCD3-201ENST00000262188 IMMTQ16891 758 aaKnown RBP32.67■■■□□ 2.82
SMARCD3-201ENST00000262188 GIMAP6Q6P9H5 292 aa32.67■■■□□ 2.82
SMARCD3-201ENST00000262188 DDRGK1Q96HY6 314 aa32.67■■■□□ 2.82
SMARCD3-201ENST00000262188 IDI2Q9BXS1 227 aa32.67■■■□□ 2.82
SMARCD3-201ENST00000262188 PPARAQ07869 468 aa32.66■■■□□ 2.82
SMARCD3-201ENST00000262188 NKX2-3Q8TAU0 364 aa32.66■■■□□ 2.82
SMARCD3-201ENST00000262188 OSBPL5Q9H0X9 879 aaPredicted RBP32.66■■■□□ 2.82
SMARCD3-201ENST00000262188 ZMYM6O95789 1325 aa32.66■■■□□ 2.82
SMARCD3-201ENST00000262188 DDX60LQ5H9U9 1706 aaKnown RBP32.66■■■□□ 2.82
SMARCD3-201ENST00000262188 MYH1P12882 1939 aa32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 KCNB2Q92953 911 aa32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 HACL1Q9UJ83 578 aa32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 MYO1BO43795 1136 aa32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 CPA1P15085 419 aa32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 CDAN1Q8IWY9 1227 aa32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 ZNF526Q8TF50 670 aaPredicted RBP32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 ADARB2Q9NS39 739 aaKnown RBP32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 TMOD2Q9NZR1 351 aa32.65■■■□□ 2.82
SMARCD3-201ENST00000262188 POLR3DP05423 398 aaPredicted RBP32.64■■■□□ 2.82
SMARCD3-201ENST00000262188 SH3BP5LQ7L8J4 393 aa32.64■■■□□ 2.82
SMARCD3-201ENST00000262188 DYNLL2Q96FJ2 89 aa32.64■■■□□ 2.82
SMARCD3-201ENST00000262188 CNTNAP1P78357 1384 aa32.64■■■□□ 2.82
SMARCD3-201ENST00000262188 DDTLA6NHG4 134 aaPredicted RBP32.63■■■□□ 2.81
SMARCD3-201ENST00000262188 RNF20Q5VTR2 975 aa32.63■■■□□ 2.81
SMARCD3-201ENST00000262188 RRP9O43818 475 aaKnown RBP32.63■■■□□ 2.81
SMARCD3-201ENST00000262188 MMP14P50281 582 aa32.63■■■□□ 2.81
SMARCD3-201ENST00000262188 ANGEL2Q5VTE6 544 aaKnown RBP32.63■■■□□ 2.81
SMARCD3-201ENST00000262188 ARPP21Q9UBL0 812 aaPredicted RBP32.63■■■□□ 2.81
SMARCD3-201ENST00000262188 LAMA4Q16363 1823 aa32.63■■■□□ 2.81
SMARCD3-201ENST00000262188 E7EWF7 191 aa32.62■■■□□ 2.81
SMARCD3-201ENST00000262188 ZKSCAN1P17029 563 aaPredicted RBP32.62■■■□□ 2.81
SMARCD3-201ENST00000262188 C12orf60Q5U649 245 aa32.62■■■□□ 2.81
SMARCD3-201ENST00000262188 EPHX2P34913 555 aa32.61■■■□□ 2.81
SMARCD3-201ENST00000262188 TMEM39BQ9GZU3 492 aa32.61■■■□□ 2.81
SMARCD3-201ENST00000262188 GGA3Q9NZ52 723 aa32.61■■■□□ 2.81
SMARCD3-201ENST00000262188 ZSCAN29Q8IWY8 852 aaPredicted RBP32.61■■■□□ 2.81
SMARCD3-201ENST00000262188 JAKMIP1Q96N16 626 aaKnown RBP32.61■■■□□ 2.81
SMARCD3-201ENST00000262188 UPF3BQ9BZI7 483 aaKnown RBP32.61■■■□□ 2.81
SMARCD3-201ENST00000262188 LAMB1P07942 1786 aa32.6■■■□□ 2.81
SMARCD3-201ENST00000262188 SBK1Q52WX2 424 aa32.6■■■□□ 2.81
SMARCD3-201ENST00000262188 SLC44A5Q8NCS7 719 aa32.6■■■□□ 2.81
SMARCD3-201ENST00000262188 NEDD4P46934 1319 aa32.6■■■□□ 2.81
SMARCD3-201ENST00000262188 PRDM1O75626 825 aa32.59■■■□□ 2.81
SMARCD3-201ENST00000262188 TAF1DQ9H5J8 278 aaPredicted RBP32.59■■■□□ 2.81
SMARCD3-201ENST00000262188 DLK2Q6UY11 383 aa32.58■■■□□ 2.81
SMARCD3-201ENST00000262188 RRAGCQ9HB90 399 aa32.58■■■□□ 2.81
SMARCD3-201ENST00000262188 WDR90Q96KV7 1748 aa32.58■■■□□ 2.81
SMARCD3-201ENST00000262188 FAM196BA6NMK8 535 aa32.58■■■□□ 2.81
SMARCD3-201ENST00000262188 EAPPQ56P03 285 aaPredicted RBP32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms