RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 TDRD7Q8NHU6 1098 aaKnown RBP16.45■□□□□ 0.22
SGCA-201ENST00000262018 ZNF341Q9BYN7 854 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
SGCA-201ENST00000262018 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 CASP7P55210 303 aa16.44■□□□□ 0.22
SGCA-201ENST00000262018 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
SGCA-201ENST00000262018 MOGSQ13724 837 aa16.44■□□□□ 0.22
SGCA-201ENST00000262018 GRIK5Q16478 980 aa16.44■□□□□ 0.22
SGCA-201ENST00000262018 TNPO2O14787 897 aaKnown RBP16.43■□□□□ 0.22
SGCA-201ENST00000262018 MGAMO43451 1857 aa16.43■□□□□ 0.22
SGCA-201ENST00000262018 GYG1P46976 350 aa16.43■□□□□ 0.22
SGCA-201ENST00000262018 HDAC1Q13547 482 aaPredicted RBP16.43■□□□□ 0.22
SGCA-201ENST00000262018 IRF5Q13568 498 aa16.43■□□□□ 0.22
SGCA-201ENST00000262018 FAM83AQ86UY5 434 aa16.43■□□□□ 0.22
SGCA-201ENST00000262018 DNAAF4Q8WXU2 420 aa16.43■□□□□ 0.22
SGCA-201ENST00000262018 FAM161BQ96MY7 647 aa16.43■□□□□ 0.22
SGCA-201ENST00000262018 GUCD1Q96NT3 240 aa16.43■□□□□ 0.22
SGCA-201ENST00000262018 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.43■□□□□ 0.22
SGCA-201ENST00000262018 HIBADHP31937 336 aaKnown RBP16.42■□□□□ 0.22
SGCA-201ENST00000262018 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
SGCA-201ENST00000262018 ANKLE1Q8NAG6 615 aa16.42■□□□□ 0.22
SGCA-201ENST00000262018 NBPF3Q9H094 633 aa16.42■□□□□ 0.22
SGCA-201ENST00000262018 TEKT1Q969V4 418 aa16.41■□□□□ 0.22
SGCA-201ENST00000262018 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
SGCA-201ENST00000262018 F6X3S4 739 aa16.4■□□□□ 0.22
SGCA-201ENST00000262018 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
SGCA-201ENST00000262018 CHAF1AQ13111 956 aaPredicted RBP16.4■□□□□ 0.22
SGCA-201ENST00000262018 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
SGCA-201ENST00000262018 ZNF594Q96JF6 807 aaPredicted RBP16.4■□□□□ 0.22
SGCA-201ENST00000262018 CNNM1Q9NRU3 951 aa16.4■□□□□ 0.22
SGCA-201ENST00000262018 POTEB2H3BUK9 544 aa16.39■□□□□ 0.21
SGCA-201ENST00000262018 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
SGCA-201ENST00000262018 FKBP1CQ5VVH2 108 aa16.39■□□□□ 0.21
SGCA-201ENST00000262018 FAM109BQ6ICB4 259 aaPredicted RBP16.39■□□□□ 0.21
SGCA-201ENST00000262018 LDHAL6AQ6ZMR3 332 aa16.39■□□□□ 0.21
SGCA-201ENST00000262018 FAM84BQ96KN1 310 aaPredicted RBP16.39■□□□□ 0.21
SGCA-201ENST00000262018 C11orf49Q9H6J7 331 aa16.39■□□□□ 0.21
SGCA-201ENST00000262018 CXCL11O14625 94 aa16.38■□□□□ 0.21
SGCA-201ENST00000262018 COA7Q96BR5 231 aa16.38■□□□□ 0.21
SGCA-201ENST00000262018 ZNF112Q9UJU3 913 aa16.38■□□□□ 0.21
SGCA-201ENST00000262018 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
SGCA-201ENST00000262018 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
SGCA-201ENST00000262018 COL9A1P20849 921 aa16.37■□□□□ 0.21
SGCA-201ENST00000262018 FOXO4P98177 505 aa16.37■□□□□ 0.21
SGCA-201ENST00000262018 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
SGCA-201ENST00000262018 BEND3Q5T5X7 828 aa16.37■□□□□ 0.21
SGCA-201ENST00000262018 SLC4A10Q6U841 1118 aa16.37■□□□□ 0.21
SGCA-201ENST00000262018 ZDHHC15Q96MV8 337 aa16.37■□□□□ 0.21
SGCA-201ENST00000262018 MDM2Q00987 491 aaPredicted RBP16.36■□□□□ 0.21
SGCA-201ENST00000262018 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
SGCA-201ENST00000262018 NOL9Q5SY16 702 aaKnown RBP16.36■□□□□ 0.21
SGCA-201ENST00000262018 APOBEC3HQ6NTF7 200 aaKnown RBP16.36■□□□□ 0.21
SGCA-201ENST00000262018 GADL1Q6ZQY3 521 aa16.36■□□□□ 0.21
SGCA-201ENST00000262018 FASTKD5Q7L8L6 764 aaKnown RBP16.36■□□□□ 0.21
SGCA-201ENST00000262018 SMCR8Q8TEV9 937 aaPredicted RBP16.36■□□□□ 0.21
SGCA-201ENST00000262018 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
SGCA-201ENST00000262018 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
SGCA-201ENST00000262018 LMBR1LQ6UX01 489 aa16.36■□□□□ 0.21
SGCA-201ENST00000262018 VPS37DQ86XT2 251 aa16.36■□□□□ 0.21
SGCA-201ENST00000262018 SMC5Q8IY18 1101 aa16.36■□□□□ 0.21
SGCA-201ENST00000262018 TBC1D22AQ8WUA7 517 aa16.36■□□□□ 0.21
SGCA-201ENST00000262018 SRCIN1Q9C0H9 1055 aa16.36■□□□□ 0.21
SGCA-201ENST00000262018 HMX1Q9NP08 348 aaPredicted RBP16.36■□□□□ 0.21
SGCA-201ENST00000262018 HMGCRP04035 888 aa16.35■□□□□ 0.21
SGCA-201ENST00000262018 TCP10Q12799 353 aa16.35■□□□□ 0.21
SGCA-201ENST00000262018 ZNF697Q5TEC3 545 aa16.35■□□□□ 0.21
SGCA-201ENST00000262018 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
SGCA-201ENST00000262018 MAFAQ8NHW3 353 aaPredicted RBP16.35■□□□□ 0.21
SGCA-201ENST00000262018 FAM151AQ8WW52 585 aa16.35■□□□□ 0.21
SGCA-201ENST00000262018 DDX60LQ5H9U9 1706 aaKnown RBP16.34■□□□□ 0.21
SGCA-201ENST00000262018 A0A0G2JLL6 359 aaPredicted RBP16.34■□□□□ 0.21
SGCA-201ENST00000262018 TRIM32Q13049 653 aa16.34■□□□□ 0.21
SGCA-201ENST00000262018 PRRT2Q7Z6L0 340 aaPredicted RBP16.34■□□□□ 0.21
SGCA-201ENST00000262018 ANKRD13CQ8N6S4 541 aa16.34■□□□□ 0.21
SGCA-201ENST00000262018 C1orf115Q9H7X2 142 aa16.34■□□□□ 0.21
SGCA-201ENST00000262018 ZHX2Q9Y6X8 837 aa16.34■□□□□ 0.21
SGCA-201ENST00000262018 TTC28Q96AY4 2481 aa16.34■□□□□ 0.21
SGCA-201ENST00000262018 CDX2Q99626 313 aaPredicted RBP16.33■□□□□ 0.2
SGCA-201ENST00000262018 MEIS3Q99687 375 aa16.33■□□□□ 0.2
SGCA-201ENST00000262018 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
SGCA-201ENST00000262018 PFASO15067 1338 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 DOCK3Q8IZD9 2030 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 EPHA10Q5JZY3 1008 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 RPAP2Q8IXW5 612 aaPredicted RBP16.32■□□□□ 0.2
SGCA-201ENST00000262018 ANKRD44Q8N8A2 993 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 SYMPKQ92797 1274 aaKnown RBP16.32■□□□□ 0.2
SGCA-201ENST00000262018 PICK1Q9NRD5 415 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 OGDHLQ9ULD0 1010 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 SLC45A1Q9Y2W3 748 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 MAST3O60307 1309 aa16.32■□□□□ 0.2
SGCA-201ENST00000262018 VCANP13611 3396 aa16.31■□□□□ 0.2
SGCA-201ENST00000262018 HHIPL2Q6UWX4 724 aa16.31■□□□□ 0.2
SGCA-201ENST00000262018 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
SGCA-201ENST00000262018 AK9Q5TCS8 1911 aa16.3■□□□□ 0.2
SGCA-201ENST00000262018 GRM8O00222 908 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms