RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 MKRN1Q9UHC7 482 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-201ENST00000261897 A1BGP04217 495 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 GNL3LQ9NVN8 582 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 FDPSP14324 419 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 USP8P40818 1118 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 PI16Q6UXB8 463 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 KBTBD3Q8NAB2 608 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 NCOA7Q8NI08 942 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 A0A1W2PQ27 194 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 A0A1W2PQ64 194 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 A0A1W2PQD8 194 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 LRRIQ3A6PVS8 624 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 BTBD18B2RXH4 712 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 ABL1P00519 1130 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 PIP4K2BP78356 416 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 NBPF6Q5VWK0 638 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 RAD9BQ6WBX8 426 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 BRAPQ7Z569 592 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 ZNF526Q8TF50 670 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 NBPF4Q96M43 638 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 NCAPGQ9BPX3 1015 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 INCENPQ9NQS7 918 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 METP08581 1390 aa18.05■□□□□ 0.48
PRPF40B-201ENST00000261897 IFIT3O14879 490 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 HPDP32754 393 aaPredicted RBP18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 RRAGBQ5VZM2 374 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 TC2NQ8N9U0 490 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 FAM71BQ8TC56 605 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 CEP126Q9P2H0 1117 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 GOLGA6BA6NDN3 693 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 TMEM67Q5HYA8 995 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 BEND6Q5SZJ8 279 aaPredicted RBP18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 CTNND2Q9UQB3 1225 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 GUCY2CP25092 1073 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 KIF23Q02241 960 aaPredicted RBP18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 ODF2Q5BJF6 829 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 SHC4Q6S5L8 630 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 SMARCC2Q8TAQ2 1214 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 IFT81Q8WYA0 676 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 DENND2AQ9ULE3 1009 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 MYO6Q9UM54 1294 aa18.04■□□□□ 0.48
PRPF40B-201ENST00000261897 GGCXP38435 758 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 ANKRD13DQ6ZTN6 518 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 KRI1Q8N9T8 703 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 MYO3AQ8NEV4 1616 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 IKBKBO14920 756 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 AIDAQ96BJ3 306 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 ZCCHC11Q5TAX3 1644 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 PPRC1Q5VV67 1664 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 SLC7A5Q01650 507 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 SLC9C2Q5TAH2 1124 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 C19orf44Q9H6X5 657 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 FAM169AQ9Y6X4 670 aa18.03■□□□□ 0.48
PRPF40B-201ENST00000261897 UBXN1Q04323 297 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 ATL3Q6DD88 541 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 METTL16Q86W50 562 aaKnown RBP18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 ANKZF1Q9H8Y5 726 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 FAM53CQ9NYF3 392 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 PPFIA4O75335 1185 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 ATP5JP18859 108 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 CXCR5P32302 372 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 GRIN1Q05586 938 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 SLC39A14Q15043 492 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 TRIM22Q8IYM9 498 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 PLCD4Q9BRC7 762 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 MAN1B1Q9UKM7 699 aa18.02■□□□□ 0.48
PRPF40B-201ENST00000261897 VWDEQ8N2E2 1590 aa18.02■□□□□ 0.47
PRPF40B-201ENST00000261897 CPS1P31327 1500 aa18.02■□□□□ 0.47
PRPF40B-201ENST00000261897 ZBTB43O43298 467 aa18.02■□□□□ 0.47
PRPF40B-201ENST00000261897 MMS22LQ6ZRQ5 1243 aa18.02■□□□□ 0.47
PRPF40B-201ENST00000261897 ADGRG1Q9Y653 693 aa18.02■□□□□ 0.47
PRPF40B-201ENST00000261897 SLC12A7Q9Y666 1083 aa18.02■□□□□ 0.47
PRPF40B-201ENST00000261897 ADGRB3O60242 1522 aa18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 MCTP2Q6DN12 878 aa18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 ANKRD18AQ8IVF6 992 aa18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 POLR3EQ9NVU0 708 aa18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 ACTN3Q08043 901 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 PDCLQ13371 301 aa18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 KCTD19Q17RG1 926 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 USP49Q70CQ1 688 aa18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-201ENST00000261897 FGAP02671 866 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 ATP6V1AP38606 617 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 E2F5Q15329 346 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 MAATS1Q7Z4T9 603 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 UBAC1Q9BSL1 405 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 CDKL5O76039 1030 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 SSRP1Q08945 709 aaKnown RBP18■□□□□ 0.47
PRPF40B-201ENST00000261897 PTPROQ16827 1216 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 EFCAB13Q8IY85 973 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 DIS3L2Q8IYB7 885 aaKnown RBP18■□□□□ 0.47
PRPF40B-201ENST00000261897 SLC24A3Q9HC58 644 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 RNF113AO15541 343 aaKnown RBP18■□□□□ 0.47
PRPF40B-201ENST00000261897 IDEP14735 1019 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms