RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 SEC31BQ9NQW1 1179 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 PRDM4Q9UKN5 801 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 ATRNO75882 1429 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 GOLGA8FQ08AF8 430 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 GOLGA8DPQ0D2H9 430 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 PUM3Q15397 648 aaKnown RBP18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 CPLX2Q6PUV4 134 aaKnown RBP18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 TMEM87BQ96K49 555 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 IMPACTQ9P2X3 320 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 KCNJ14Q9UNX9 436 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 SLC12A7Q9Y666 1083 aa18.9■□□□□ 0.62
TM9SF1-201ENST00000261789 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.89■□□□□ 0.62
TM9SF1-201ENST00000261789 NPHP1O15259 732 aa18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 SFPQP23246 707 aaKnown RBP eCLIP18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 GRIN1Q05586 938 aa18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 LPIN2Q92539 896 aa18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 A0A0G2JS52 829 aa18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 BTBD18B2RXH4 712 aa18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 PATL2C9JE40 543 aaKnown RBP18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 FGFR2P21802 821 aa18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 TRIM29Q14134 588 aa18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 METTL16Q86W50 562 aaKnown RBP18.89■□□□□ 0.61
TM9SF1-201ENST00000261789 PPP6R2O75170 966 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 PPP1R13BQ96KQ4 1090 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 TUBE1Q9UJT0 475 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 MYH3P11055 1940 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 UQCRFS1P1P0C7P4 283 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 TPM4P67936 248 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 RESP18Q5W5W9 173 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 SGMS1Q86VZ5 419 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 MIGA1Q8NAN2 632 aa18.88■□□□□ 0.61
TM9SF1-201ENST00000261789 GSG1L2A8MUP6 293 aa18.87■□□□□ 0.61
TM9SF1-201ENST00000261789 IGSF3O75054 1194 aa18.87■□□□□ 0.61
TM9SF1-201ENST00000261789 BCAMP50895 628 aa18.87■□□□□ 0.61
TM9SF1-201ENST00000261789 SSRP1Q08945 709 aaKnown RBP18.87■□□□□ 0.61
TM9SF1-201ENST00000261789 LCORLQ8N3X6 602 aa18.87■□□□□ 0.61
TM9SF1-201ENST00000261789 KIF18AQ8NI77 898 aa18.87■□□□□ 0.61
TM9SF1-201ENST00000261789 IQSEC3Q9UPP2 1182 aaPredicted RBP18.87■□□□□ 0.61
TM9SF1-201ENST00000261789 ITGB4P16144 1822 aa18.87■□□□□ 0.61
TM9SF1-201ENST00000261789 SMIM22K7EJ46 135 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 SERPINC1P01008 464 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 JMYQ8N9B5 988 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 TIGD1Q96MW7 591 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 KCNH3Q9ULD8 1083 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 PCDHA5Q9Y5H7 936 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 TMEM232C9JQI7 657 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 BMP6P22004 513 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 TOB1P50616 345 aaPredicted RBP18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 UBASH3AP57075 661 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 SYCP1Q15431 976 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 SUSD4Q5VX71 490 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 SYT10Q6XYQ8 523 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 CNNM3Q8NE01 707 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 NUP98P52948 1817 aa18.86■□□□□ 0.61
TM9SF1-201ENST00000261789 ATP2B1P20020 1258 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 PDE4BQ07343 736 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 MAP3K12Q12852 859 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 LRRN4CLQ8ND94 238 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 FANCLQ9NW38 375 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 SLIT2O94813 1529 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 IKBKBO14920 756 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 TDO2P48775 406 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 NR5A1Q13285 461 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 ELF2Q15723 593 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 CFAP100Q494V2 611 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 AKNAD1Q5T1N1 836 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 MFSD6Q6ZSS7 791 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 MPHOSPH8Q99549 860 aa18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 ZHX1Q9UKY1 873 aaPredicted RBP18.85■□□□□ 0.61
TM9SF1-201ENST00000261789 LIFRP42702 1097 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 MYL5Q02045 173 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 KRBA2Q6ZNG9 492 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 NOSTRINQ8IVI9 506 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 ZNF34Q8IZ26 560 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 SLC4A4Q9Y6R1 1079 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 LTBP4Q8N2S1 1624 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 BCL9O00512 1426 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 MROH5Q6ZUA9 1318 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 FMNL1O95466 1100 aaPredicted RBP18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 SLC5A1P13866 664 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 ALX1Q15699 326 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 DIS3L2Q8IYB7 885 aaKnown RBP18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 LRP6O75581 1613 aa18.84■□□□□ 0.61
TM9SF1-201ENST00000261789 KMT5BQ4FZB7 885 aa18.83■□□□□ 0.61
TM9SF1-201ENST00000261789 GRAMD1CQ8IYS0 662 aa18.83■□□□□ 0.61
TM9SF1-201ENST00000261789 NUP133Q8WUM0 1156 aa18.83■□□□□ 0.61
TM9SF1-201ENST00000261789 KCND1Q9NSA2 647 aa18.83■□□□□ 0.61
TM9SF1-201ENST00000261789 CGNQ9P2M7 1197 aaKnown RBP18.83■□□□□ 0.61
TM9SF1-201ENST00000261789 WTIPA6NIX2 430 aaPredicted RBP18.83■□□□□ 0.6
TM9SF1-201ENST00000261789 CUTAO60888 179 aa18.83■□□□□ 0.6
TM9SF1-201ENST00000261789 ZNF827Q17R98 1081 aa18.83■□□□□ 0.6
TM9SF1-201ENST00000261789 PDILTQ8N807 584 aa18.83■□□□□ 0.6
TM9SF1-201ENST00000261789 MMP1P03956 469 aa18.82■□□□□ 0.6
TM9SF1-201ENST00000261789 DMTNQ08495 405 aa18.82■□□□□ 0.6
TM9SF1-201ENST00000261789 KRI1Q8N9T8 703 aaKnown RBP18.82■□□□□ 0.6
TM9SF1-201ENST00000261789 OXER1Q8TDS5 423 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms