RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 PTPRMP28827 1452 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 UNC13BO14795 1591 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 PPARAQ07869 468 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 IQUBQ8NA54 791 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 ZBTB21Q9ULJ3 1066 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 CA8P35219 290 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 GRAPQ13588 217 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 GRAPLQ8TC17 118 aaPredicted RBP15.8■□□□□ 0.12
CDH1-201ENST00000261769 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 ATP10DQ9P241 1426 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 NEFHP12036 1026 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 HAUS3Q68CZ6 603 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 USP31Q70CQ4 1352 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 KIF2AO00139 706 aaPredicted RBP15.8■□□□□ 0.12
CDH1-201ENST00000261769 N4BP3O15049 544 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 CERKLQ49MI3 558 aaPredicted RBP15.8■□□□□ 0.12
CDH1-201ENST00000261769 CCDC17Q96LX7 622 aa15.8■□□□□ 0.12
CDH1-201ENST00000261769 ADCY7P51828 1080 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 KRT25Q7Z3Z0 450 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 SPAG5Q96R06 1193 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 CTDSPL2Q05D32 466 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 MCTP2Q6DN12 878 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 HAUS7Q99871 368 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.79■□□□□ 0.12
CDH1-201ENST00000261769 PCP11498 1178 aaKnown RBP15.79■□□□□ 0.12
CDH1-201ENST00000261769 UBE3CQ15386 1083 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 TXNRD1Q16881 649 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 TBC1D5Q92609 795 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 DHX58Q96C10 678 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 DIP2CQ9Y2E4 1556 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 CCDC112Q8NEF3 446 aa15.79■□□□□ 0.12
CDH1-201ENST00000261769 GOLGA6L10A6NI86 522 aa15.78■□□□□ 0.12
CDH1-201ENST00000261769 PLCD1P51178 756 aa15.78■□□□□ 0.12
CDH1-201ENST00000261769 CTAGE1Q96RT6 745 aa15.78■□□□□ 0.12
CDH1-201ENST00000261769 ATP8A2Q9NTI2 1148 aa15.78■□□□□ 0.12
CDH1-201ENST00000261769 NDUFB9Q9Y6M9 179 aa15.78■□□□□ 0.12
CDH1-201ENST00000261769 MYCLP12524 364 aaPredicted RBP15.78■□□□□ 0.12
CDH1-201ENST00000261769 CIAPIN1Q6FI81 312 aa15.78■□□□□ 0.12
CDH1-201ENST00000261769 AZI2Q9H6S1 392 aa15.78■□□□□ 0.12
CDH1-201ENST00000261769 NONOQ15233 471 aaKnown RBP eCLIP15.78■□□□□ 0.12
CDH1-201ENST00000261769 SEPT7Q16181 437 aaKnown RBP15.78■□□□□ 0.12
CDH1-201ENST00000261769 TAOK3Q9H2K8 898 aa15.78■□□□□ 0.12
CDH1-201ENST00000261769 CPSF1Q10570 1443 aaKnown RBP15.77■□□□□ 0.12
CDH1-201ENST00000261769 ERLIN1O75477 346 aa15.77■□□□□ 0.12
CDH1-201ENST00000261769 PHKA1P46020 1223 aa15.77■□□□□ 0.12
CDH1-201ENST00000261769 GSDMDP57764 484 aa15.77■□□□□ 0.12
CDH1-201ENST00000261769 IFNL3Q8IZI9 196 aa15.77■□□□□ 0.12
CDH1-201ENST00000261769 KIF5CO60282 957 aa15.77■□□□□ 0.11
CDH1-201ENST00000261769 ZNF853P0CG23 659 aa15.77■□□□□ 0.11
CDH1-201ENST00000261769 CPLX3Q8WVH0 158 aa15.77■□□□□ 0.11
CDH1-201ENST00000261769 CCDC65Q8IXS2 484 aa15.77■□□□□ 0.11
CDH1-201ENST00000261769 SEC31BQ9NQW1 1179 aa15.77■□□□□ 0.11
CDH1-201ENST00000261769 PKD2L1Q9P0L9 805 aa15.77■□□□□ 0.11
CDH1-201ENST00000261769 BICDL2A1A5D9 508 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 NEMFO60524 1076 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 CFBP00751 764 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 DBNDD1Q9H9R9 158 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 SMTNP53814 917 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 ICA1Q05084 483 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 FERMT1Q9BQL6 677 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 COA1Q9GZY4 146 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 PRAMEF22A3QJZ6 481 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 RPL13P26373 211 aaKnown RBP15.76■□□□□ 0.11
CDH1-201ENST00000261769 KIFC2Q96AC6 838 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 PPP1R2P41236 205 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 ARMC9Q7Z3E5 817 aa15.76■□□□□ 0.11
CDH1-201ENST00000261769 GNPTABQ3T906 1256 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 ISM2Q6H9L7 571 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 SV2BQ7L1I2 683 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 PAGR1Q9BTK6 254 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 PUS3Q9BZE2 481 aaKnown RBP15.75■□□□□ 0.11
CDH1-201ENST00000261769 SYNCQ9H7C4 482 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 GLI2P10070 1586 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 SUSD4Q5VX71 490 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 NLRX1Q86UT6 975 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 IFT74Q96LB3 600 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 MMRN2Q9H8L6 949 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 SWAP70Q9UH65 585 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 SNX14Q9Y5W7 946 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 CTNNA2P26232 953 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 CCT6AP40227 531 aaKnown RBP15.75■□□□□ 0.11
CDH1-201ENST00000261769 DNM1Q05193 864 aaKnown RBP15.75■□□□□ 0.11
CDH1-201ENST00000261769 HOMER2Q9NSB8 354 aa15.75■□□□□ 0.11
CDH1-201ENST00000261769 BSDC1Q9NW68 430 aaPredicted RBP15.75■□□□□ 0.11
CDH1-201ENST00000261769 ARID4AP29374 1257 aaPredicted RBP15.74■□□□□ 0.11
CDH1-201ENST00000261769 CCNA1P78396 465 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 ABCB5Q2M3G0 1257 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 KLHL40Q2TBA0 621 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 FAM47AQ5JRC9 791 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 GADL1Q6ZQY3 521 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 CNPY2Q9Y2B0 182 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 USP17L3A6NCW0 530 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 USP17L4A6NCW7 530 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 ZNF174Q15697 407 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 USP17L1Q7RTZ2 530 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 DIS3L2Q8IYB7 885 aaKnown RBP15.74■□□□□ 0.11
CDH1-201ENST00000261769 TM6SF1Q9BZW5 370 aa15.74■□□□□ 0.11
CDH1-201ENST00000261769 KCNG1Q9UIX4 513 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms