RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 DDX39AO00148 427 aaKnown RBP15.97■□□□□ 0.15
CUX2-201ENST00000261726 CCNT1O60563 726 aaKnown RBP15.97■□□□□ 0.15
CUX2-201ENST00000261726 TFCP2Q12800 502 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 NACA2Q9H009 215 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 RFC1P35251 1148 aaPredicted RBP15.97■□□□□ 0.15
CUX2-201ENST00000261726 UIMC1Q96RL1 719 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 NUF2Q9BZD4 464 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 TFCP2L1Q9NZI6 479 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 PDE4DQ08499 809 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 FAM114A2Q9NRY5 505 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 CNGA4Q8IV77 575 aa15.96■□□□□ 0.15
CUX2-201ENST00000261726 ASIC2Q16515 512 aa15.96■□□□□ 0.15
CUX2-201ENST00000261726 KRBA2Q6ZNG9 492 aa15.96■□□□□ 0.15
CUX2-201ENST00000261726 STK10O94804 968 aaKnown RBP15.96■□□□□ 0.15
CUX2-201ENST00000261726 ZNF365Q70YC5 407 aa15.96■□□□□ 0.15
CUX2-201ENST00000261726 CACNA2D3Q8IZS8 1091 aa15.96■□□□□ 0.15
CUX2-201ENST00000261726 VCX3BQ9H321 246 aa15.96■□□□□ 0.15
CUX2-201ENST00000261726 ZNF408Q9H9D4 720 aa15.96■□□□□ 0.15
CUX2-201ENST00000261726 ZKSCAN5Q9Y2L8 839 aa15.96■□□□□ 0.15
CUX2-201ENST00000261726 STRN3Q13033 797 aa15.96■□□□□ 0.14
CUX2-201ENST00000261726 ZYXQ15942 572 aaKnown RBP15.96■□□□□ 0.14
CUX2-201ENST00000261726 GBP7Q8N8V2 638 aaPredicted RBP15.96■□□□□ 0.14
CUX2-201ENST00000261726 RBM28Q9NW13 759 aaKnown RBP15.96■□□□□ 0.14
CUX2-201ENST00000261726 IRS4O14654 1257 aaPredicted RBP15.95■□□□□ 0.14
CUX2-201ENST00000261726 SMTNP53814 917 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 LIN9Q5TKA1 542 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 ADGBQ8N7X0 1667 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 RFX1P22670 979 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 IFT74Q96LB3 600 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 EVCP57679 992 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 CASC4Q6P4E1 433 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 AFAP1L1Q8TED9 768 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 ATP8B2P98198 1209 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 C8orf74Q6P047 294 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 KSR2Q6VAB6 950 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 GTPBP4Q9BZE4 634 aaKnown RBP15.95■□□□□ 0.14
CUX2-201ENST00000261726 TUBB4AP04350 444 aa15.95■□□□□ 0.14
CUX2-201ENST00000261726 MYCLP12524 364 aaPredicted RBP15.94■□□□□ 0.14
CUX2-201ENST00000261726 XRCC6P12956 609 aaKnown RBP eCLIP15.94■□□□□ 0.14
CUX2-201ENST00000261726 U2AF2P26368 475 aaKnown RBP eCLIP15.94■□□□□ 0.14
CUX2-201ENST00000261726 TBC1D8BQ0IIM8 1120 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 LONRF3Q496Y0 759 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 GBP1P32455 592 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 MAN1A1P33908 653 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 TPTE2Q6XPS3 522 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 BRAPQ7Z569 592 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 AFAP1L2Q8N4X5 818 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 TXNDC9O14530 226 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 CALUO43852 315 aaPredicted RBP15.94■□□□□ 0.14
CUX2-201ENST00000261726 BUB1BO60566 1050 aaPredicted RBP15.94■□□□□ 0.14
CUX2-201ENST00000261726 POLD1P28340 1107 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 MCUR1Q96AQ8 359 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 IGSF22Q8N9C0 903 aa15.94■□□□□ 0.14
CUX2-201ENST00000261726 CWF19L2Q2TBE0 894 aaKnown RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 UBL4BQ8N7F7 174 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 GPHNQ9NQX3 736 aaPredicted RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 RTCBQ9Y3I0 505 aaKnown RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 TUBB4BP68371 445 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 PDE1CQ14123 709 aaPredicted RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 PIK3AP1Q6ZUJ8 805 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 HDAC1Q13547 482 aaPredicted RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 BEND3Q5T5X7 828 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 RPRD2Q5VT52 1461 aaKnown RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 NOP56O00567 594 aaKnown RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 NCAPH2Q6IBW4 605 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 GSDMBQ8TAX9 411 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 PICK1Q9NRD5 415 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 ELP1O95163 1332 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 ACTN4O43707 911 aaKnown RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 MBD4O95243 580 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
CUX2-201ENST00000261726 TMOD4Q9NZQ9 345 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 TBC1D7Q9P0N9 293 aa15.93■□□□□ 0.14
CUX2-201ENST00000261726 NAPGQ99747 312 aaPredicted RBP15.92■□□□□ 0.14
CUX2-201ENST00000261726 SWAP70Q9UH65 585 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 ASIC3Q9UHC3 531 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 MYL5Q02045 173 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 DUOX2Q9NRD8 1548 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 DDB1Q16531 1140 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 CCDC62Q6P9F0 684 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 ALDH1L1O75891 902 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 KRT19P08727 400 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 DIXDC1Q155Q3 683 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 DHX32Q7L7V1 743 aaKnown RBP15.92■□□□□ 0.14
CUX2-201ENST00000261726 RSPH3Q86UC2 560 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 HHATQ5VTY9 493 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 LMNTD2Q8IXW0 634 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 ANKRD44Q8N8A2 993 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 GCC2Q8IWJ2 1684 aa15.92■□□□□ 0.14
CUX2-201ENST00000261726 TXKP42681 527 aa15.91■□□□□ 0.14
CUX2-201ENST00000261726 VWA3BQ502W6 1294 aa15.91■□□□□ 0.14
CUX2-201ENST00000261726 TEX11Q8IYF3 940 aa15.91■□□□□ 0.14
CUX2-201ENST00000261726 C8orf58Q8NAV2 365 aa15.91■□□□□ 0.14
CUX2-201ENST00000261726 CACYBPQ9HB71 228 aaKnown RBP15.91■□□□□ 0.14
CUX2-201ENST00000261726 NAP1L4Q99733 375 aaKnown RBP15.91■□□□□ 0.14
CUX2-201ENST00000261726 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
CUX2-201ENST00000261726 ABCA8O94911 1581 aa15.91■□□□□ 0.14
CUX2-201ENST00000261726 CEP128Q6ZU80 1094 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms