RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CASP14P31944 242 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 GTF2A1P52655 376 aaPredicted RBP11.49□□□□□ -0.57
PALB2-201ENST00000261584 SPTY2D1Q68D10 685 aaPredicted RBP11.49□□□□□ -0.57
PALB2-201ENST00000261584 USP49Q70CQ1 688 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.49□□□□□ -0.57
PALB2-201ENST00000261584 TEX33O43247 280 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 SRGAP2O75044 1071 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 HLTFQ14527 1009 aaKnown RBP eCLIP11.48□□□□□ -0.571e-6■■□□□ 14.5
PALB2-201ENST00000261584 CCDC122Q5T0U0 273 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 SPECC1LQ69YQ0 1117 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 EPSTI1Q96J88 318 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 TMOD3Q9NYL9 352 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 ARHGAP6O43182 974 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 GRIN1Q05586 938 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 LONRF2Q1L5Z9 754 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 TAX1BP1Q86VP1 789 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 SLC35F6Q8N357 371 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 CYP2D7A0A087X1C5 515 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 TRIM75PA6NK02 468 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 YEATS4O95619 227 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 EPS15P42566 896 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 PIK3AP1Q6ZUJ8 805 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 FMR1NBQ8N0W7 255 aaPredicted RBP11.48□□□□□ -0.57
PALB2-201ENST00000261584 ACSBG1Q96GR2 724 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 ARHGEF10O15013 1369 aa11.48□□□□□ -0.57
PALB2-201ENST00000261584 ITGA6P23229 1130 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 MMRN2Q9H8L6 949 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 SEPT11Q9NVA2 429 aaKnown RBP11.47□□□□□ -0.57
PALB2-201ENST00000261584 TCHHQ07283 1943 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
PALB2-201ENST00000261584 KIF23Q02241 960 aaPredicted RBP11.47□□□□□ -0.57
PALB2-201ENST00000261584 CDK5RAP3Q96JB5 506 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 LLPHQ9BRT6 129 aaKnown RBP11.47□□□□□ -0.57
PALB2-201ENST00000261584 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 GNL3LQ9NVN8 582 aaKnown RBP11.47□□□□□ -0.57
PALB2-201ENST00000261584 TET3O43151 1660 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 ATP7BP35670 1465 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 CTIFO43310 598 aaKnown RBP11.47□□□□□ -0.57
PALB2-201ENST00000261584 CXCR5P32302 372 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 RBL2Q08999 1139 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 RAD51AP2Q09MP3 1159 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 PLCD4Q9BRC7 762 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 CCDC113Q9H0I3 377 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 HELLSQ9NRZ9 838 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 PCDHB6Q9Y5E3 794 aa11.47□□□□□ -0.57
PALB2-201ENST00000261584 CDK12Q9NYV4 1490 aaPredicted RBP11.46□□□□□ -0.57
PALB2-201ENST00000261584 KDRP35968 1356 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 AKR1B10O60218 316 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 N4BP1O75113 896 aaKnown RBP11.46□□□□□ -0.57
PALB2-201ENST00000261584 PHKA1P46020 1223 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 ATP1A2P50993 1020 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 NUTM2AQ8IVF1 878 aaPredicted RBP11.46□□□□□ -0.57
PALB2-201ENST00000261584 RASGRP4Q8TDF6 673 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 RIN2Q8WYP3 895 aaPredicted RBP11.46□□□□□ -0.57
PALB2-201ENST00000261584 CAMSAP1Q5T5Y3 1602 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 ABCA9Q8IUA7 1624 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 UBA7P41226 1012 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 LIG3P49916 1009 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 FAM47AQ5JRC9 791 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 KCTD16Q68DU8 428 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 UBA5Q9GZZ9 404 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 RTEL1Q9NZ71 1219 aa11.46□□□□□ -0.57
PALB2-201ENST00000261584 USP6P35125 1406 aa11.46□□□□□ -0.58
PALB2-201ENST00000261584 A0A0U1RQJ8 604 aa11.46□□□□□ -0.58
PALB2-201ENST00000261584 SMIM23A6NLE4 172 aa11.46□□□□□ -0.58
PALB2-201ENST00000261584 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.58
PALB2-201ENST00000261584 CTCFLQ8NI51 663 aaPredicted RBP11.46□□□□□ -0.58
PALB2-201ENST00000261584 ATRIPQ8WXE1 791 aa11.46□□□□□ -0.58
PALB2-201ENST00000261584 CCDC47Q96A33 483 aaKnown RBP11.46□□□□□ -0.58
PALB2-201ENST00000261584 WWC3Q9ULE0 1092 aa11.46□□□□□ -0.58
PALB2-201ENST00000261584 MYOM1P52179 1685 aa11.46□□□□□ -0.58
PALB2-201ENST00000261584 KIAA0754O94854 1291 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 GUCY1A2P33402 732 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 PDE4BQ07343 736 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 SPA17Q15506 151 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 APPBP2Q92624 585 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 HDAC6Q9UBN7 1215 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 TSPY2A6NKD2 308 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 KRT18P05783 430 aaKnown RBP11.45□□□□□ -0.58
PALB2-201ENST00000261584 FDPSP14324 419 aaKnown RBP11.45□□□□□ -0.58
PALB2-201ENST00000261584 CMA1P23946 247 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 CDC27P30260 824 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 HPDP32754 393 aaPredicted RBP11.45□□□□□ -0.58
PALB2-201ENST00000261584 CYP27A1Q02318 531 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 CACNA2D4Q7Z3S7 1137 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 MAATS1Q7Z4T9 603 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 CSRNP2Q9H175 543 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 IMPACTQ9P2X3 320 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
PALB2-201ENST00000261584 CPSF1Q10570 1443 aaKnown RBP11.45□□□□□ -0.58
PALB2-201ENST00000261584 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 COL3A1P02461 1466 aaPredicted RBP11.45□□□□□ -0.58
PALB2-201ENST00000261584 STAT6P42226 847 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 IFIT1BQ5T764 474 aaKnown RBP11.45□□□□□ -0.58
PALB2-201ENST00000261584 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
PALB2-201ENST00000261584 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms