RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 TTF2Q9UNY4 1162 aaKnown RBP4.86□□□□□ -1.63
VPS13C-202ENST00000261517 N4BP3O15049 544 aa4.86□□□□□ -1.63
VPS13C-202ENST00000261517 HIBADHP31937 336 aaKnown RBP4.86□□□□□ -1.63
VPS13C-202ENST00000261517 IFFO1Q0D2I5 559 aa4.86□□□□□ -1.63
VPS13C-202ENST00000261517 KIF5AQ12840 1032 aa4.86□□□□□ -1.63
VPS13C-202ENST00000261517 UBE4AQ14139 1066 aa4.86□□□□□ -1.63
VPS13C-202ENST00000261517 SV2BQ7L1I2 683 aa4.86□□□□□ -1.63
VPS13C-202ENST00000261517 MAP2P11137 1827 aaKnown RBP4.86□□□□□ -1.63
VPS13C-202ENST00000261517 FAM13AO94988 1023 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 MAP7Q14244 749 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 ERCC6LQ2NKX8 1250 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 KCTD17Q8N5Z5 321 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 MTRF1LQ9UGC7 380 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 TNNQ9UQP3 1299 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 MYO3BQ8WXR4 1341 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 SYCE3A1L190 88 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CFAP157Q5JU67 520 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 ZBTB38Q8NAP3 1195 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 SPAG5Q96R06 1193 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 SEPT11Q9NVA2 429 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 PPP1R1BQ9UD71 204 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 GCFC2P16383 781 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 UBASH3AP57075 661 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 SNW1Q13573 536 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 NLGN1Q8N2Q7 840 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CCDC8Q9H0W5 538 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 IFT122Q9HBG6 1241 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 STK10O94804 968 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CTNNA2P26232 953 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 EIF6P56537 245 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 TNNI3KQ59H18 835 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 TAOK1Q7L7X3 1001 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 SUGT1Q9Y2Z0 365 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 FPGT-TNNI3KV9GXZ4 949 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 MED23Q9ULK4 1368 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 HSF2BPO75031 334 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 NEK11Q8NG66 645 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 USP26Q9BXU7 913 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 ATP8A2Q9NTI2 1148 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 STAP2Q9UGK3 403 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CDC37Q16543 378 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CFAP58Q5T655 872 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 LIN9Q5TKA1 542 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 GPR161Q8N6U8 529 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 RNF214Q8ND24 703 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 SSH3Q8TE77 659 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 AK8Q96MA6 479 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 H0YIN7 160 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 ZBTB7BO15156 539 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 FOSBP53539 338 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 SH3BGRP55822 239 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 TCIRG1Q13488 830 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CCDC117Q8IWD4 279 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CCDC26Q8TAB7 109 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 ZC3H15Q8WU90 426 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 PARP2Q9UGN5 583 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 FAM177BA6PVY3 158 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 FDX1P10109 184 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 MICU3Q86XE3 530 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 ZBTB3Q9H5J0 574 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CEBPZQ03701 1054 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 TTLL12Q14166 644 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 RCSD1Q6JBY9 416 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 NCAPGQ9BPX3 1015 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 MROH2AA6NES4 1674 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 TDRD12Q587J7 1177 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 Q6ZUG5 572 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CDHR1Q96JP9 859 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 BZW2Q9Y6E2 419 aaKnown RBP4.85□□□□□ -1.63
VPS13C-202ENST00000261517 UBE3CQ15386 1083 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 WDR44Q5JSH3 913 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 OTUD6AQ7L8S5 288 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 AFAP1L2Q8N4X5 818 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 FAM114A2Q9NRY5 505 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 DIP2CQ9Y2E4 1556 aa4.85□□□□□ -1.63
VPS13C-202ENST00000261517 CTSWP56202 376 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 MAP2K1Q02750 393 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-202ENST00000261517 FAM196AQ6ZSG2 479 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 TMEM87AQ8NBN3 555 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 COPRSQ9NQ92 184 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 TRPC5Q9UL62 973 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-202ENST00000261517 PTPRUQ92729 1446 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 GSTTP1A0A1W2PQM5 241 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 GOLGA6CA6NDK9 693 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 GOLGA6BA6NDN3 693 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 GOLGA6DP0CG33 693 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 PLCD4Q9BRC7 762 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 ARFGAP3Q9NP61 516 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 GOLGA6AQ9NYA3 693 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 SGSM2O43147 1006 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 AKR1B10O60218 316 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 GPATCH4Q5T3I0 446 aaKnown RBP4.84□□□□□ -1.63
VPS13C-202ENST00000261517 UBL4BQ8N7F7 174 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 DYDC1Q8WWB3 177 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 MAN1A1P33908 653 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 MEIS3Q99687 375 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 RTN4Q9NQC3 1192 aaKnown RBP4.84□□□□□ -1.63
VPS13C-202ENST00000261517 UQCRHLA0A096LP55 91 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 UQCRHP07919 91 aa4.84□□□□□ -1.63
VPS13C-202ENST00000261517 CTR9Q6PD62 1173 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms