RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 PLCG2P16885 1265 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 CLNS1AP54105 237 aaKnown RBP16.66■□□□□ 0.26
C12orf49-201ENST00000261318 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
C12orf49-201ENST00000261318 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 DENND4BO75064 1496 aaPredicted RBP16.66■□□□□ 0.26
C12orf49-201ENST00000261318 RNASE9P60153 205 aaKnown RBP16.66■□□□□ 0.26
C12orf49-201ENST00000261318 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
C12orf49-201ENST00000261318 SPOPO43791 374 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 NPATQ14207 1427 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 NEDD9Q14511 834 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 SGSM2O43147 1006 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 TPD52P55327 224 aaPredicted RBP16.66■□□□□ 0.26
C12orf49-201ENST00000261318 POSTNQ15063 836 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 ASIC2Q16515 512 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 TESK2Q96S53 571 aa16.66■□□□□ 0.26
C12orf49-201ENST00000261318 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 CROCCP2Q86T23 111 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 NLRP3Q96P20 1036 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 UAP1Q16222 522 aaPredicted RBP16.65■□□□□ 0.26
C12orf49-201ENST00000261318 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 MAPK8IP1Q9UQF2 711 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 TMEM63CQ9P1W3 806 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 PAK2Q13177 524 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 LETM2Q2VYF4 491 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 SLC9C1Q4G0N8 1177 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 FAM169AQ9Y6X4 670 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 MRPS9P82933 396 aaKnown RBP16.65■□□□□ 0.26
C12orf49-201ENST00000261318 MTX1Q13505 466 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 TTC16Q8NEE8 873 aa16.65■□□□□ 0.26
C12orf49-201ENST00000261318 NCOA5Q9HCD5 579 aaKnown RBP16.65■□□□□ 0.26
C12orf49-201ENST00000261318 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
C12orf49-201ENST00000261318 ERCC5P28715 1186 aaPredicted RBP16.64■□□□□ 0.25
C12orf49-201ENST00000261318 PARP1P09874 1014 aaKnown RBP16.64■□□□□ 0.25
C12orf49-201ENST00000261318 B4E1Z4 1266 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 CFAP221Q4G0U5 840 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 PLCB1Q9NQ66 1216 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 ZNF500O60304 480 aaPredicted RBP16.64■□□□□ 0.25
C12orf49-201ENST00000261318 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 NFE2L3Q9Y4A8 694 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 TSNAXIP1Q2TAA8 658 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 FAM173BQ6P4H8 233 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 A0A1W2PP64 1363 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 NAP1L4Q99733 375 aaKnown RBP16.64■□□□□ 0.25
C12orf49-201ENST00000261318 TSKSQ9UJT2 592 aa16.64■□□□□ 0.25
C12orf49-201ENST00000261318 FAM212AQ96EL1 285 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 CABS1Q96KC9 395 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 ODF2LQ9ULJ1 636 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 KRT5P13647 590 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 PLCD3Q8N3E9 789 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 KRT9P35527 623 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 ZSCAN26Q16670 478 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 F8W031 263 aaPredicted RBP16.63■□□□□ 0.25
C12orf49-201ENST00000261318 CLUL1Q15846 466 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 VCX3BQ9H321 246 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 FEZ2Q9UHY8 353 aaPredicted RBP16.63■□□□□ 0.25
C12orf49-201ENST00000261318 NIP7Q9Y221 180 aaKnown RBP eCLIP16.63■□□□□ 0.25
C12orf49-201ENST00000261318 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
C12orf49-201ENST00000261318 TNFAIP3P21580 790 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 CARD14Q9BXL6 1004 aa16.63■□□□□ 0.25
C12orf49-201ENST00000261318 ATP6V1AP38606 617 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 RABEP2Q9H5N1 569 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 CALUO43852 315 aaPredicted RBP16.62■□□□□ 0.25
C12orf49-201ENST00000261318 MBD4O95243 580 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 PPM1FP49593 454 aaPredicted RBP16.62■□□□□ 0.25
C12orf49-201ENST00000261318 DNMT1P26358 1616 aaKnown RBP16.62■□□□□ 0.25
C12orf49-201ENST00000261318 BRD3Q15059 726 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 AKNAD1Q5T1N1 836 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 GKAP1Q5VSY0 366 aaPredicted RBP16.62■□□□□ 0.25
C12orf49-201ENST00000261318 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 MIPOL1Q8TD10 442 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 E7EVH7 732 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 ARHGEF2Q92974 986 aaKnown RBP16.62■□□□□ 0.25
C12orf49-201ENST00000261318 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
C12orf49-201ENST00000261318 CCDC62Q6P9F0 684 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 RPGRIP1Q96KN7 1286 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 PPP1R12CQ9BZL4 782 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 MTMR3Q13615 1198 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 TNNI3KQ59H18 835 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 FPGT-TNNI3KV9GXZ4 949 aa16.62■□□□□ 0.25
C12orf49-201ENST00000261318 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 MCUR1Q96AQ8 359 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 IRS4O14654 1257 aaPredicted RBP16.61■□□□□ 0.25
C12orf49-201ENST00000261318 PLS1Q14651 629 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 ERCC6LQ2NKX8 1250 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 FAM184BQ9ULE4 1060 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 ZNF131P52739 623 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 ZWINTO95229 277 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
C12orf49-201ENST00000261318 XPO4Q9C0E2 1151 aaKnown RBP16.61■□□□□ 0.25
C12orf49-201ENST00000261318 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
C12orf49-201ENST00000261318 WDR44Q5JSH3 913 aa16.6■□□□□ 0.25
C12orf49-201ENST00000261318 SYCE1Q8N0S2 351 aa16.6■□□□□ 0.25
C12orf49-201ENST00000261318 GMNNO75496 209 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms