RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 DOCK2Q92608 1830 aa12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 EFCAB8A8MWE9 144 aa12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 GNAT2P19087 354 aa12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 PHKA1P46020 1223 aa12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 GPS2Q13227 327 aa12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 MB21D2Q8IYB1 491 aaPredicted RBP12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 SPATA5Q8NB90 893 aa12.45□□□□□ -0.42
CHRNA1-201ENST00000261007 A0A1W2PQ27 194 aa12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 A0A1W2PQ64 194 aa12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 A0A1W2PQD8 194 aa12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 PTPDC1A2A3K4 754 aa12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 PDE6AP16499 860 aa12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 RC3H1Q5TC82 1133 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 FCHSD1Q86WN1 690 aa12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 PIH1D3Q9NQM4 214 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 SCN7AQ01118 1682 aa12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 SALL1Q9NSC2 1324 aa12.44□□□□□ -0.42
CHRNA1-201ENST00000261007 FOXP2O15409 715 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 PRC1O43663 620 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 SF3B3Q15393 1217 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 FMR1NBQ8N0W7 255 aaPredicted RBP12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 FSIP1Q8NA03 581 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 AIDAQ96BJ3 306 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 LRRC2Q9BYS8 371 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 FEZ2Q9UHY8 353 aaPredicted RBP12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 CARMIL3Q8ND23 1372 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 ZNF532Q9HCE3 1301 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 NPHP1O15259 732 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 TADA3O75528 432 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 ADALQ6DHV7 355 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 TMC6Q7Z403 805 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 MNS1Q8NEH6 495 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 MRPS27Q92552 414 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 NYXQ9GZU5 481 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 GNL3LQ9NVN8 582 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 DNAI1Q9UI46 699 aa12.43□□□□□ -0.42
CHRNA1-201ENST00000261007 TCRBV5S4A2TA0A5A2 114 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 RAD51AP2Q09MP3 1159 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 ZRSR1Q15695 479 aaKnown RBP12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 HOMER1Q86YM7 354 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 TMEM87BQ96K49 555 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 USP28Q96RU2 1077 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 PSD3Q9NYI0 1048 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 KIAA1468Q9P260 1216 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 SPATA31A6Q5VVP1 1343 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
CHRNA1-201ENST00000261007 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 PATL2C9JE40 543 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 IKBKBO14920 756 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 CPLX2Q6PUV4 134 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 ANKRD18AQ8IVF6 992 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 FNBP4Q8N3X1 1017 aaPredicted RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 LRRN4CLQ8ND94 238 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 NGLY1Q96IV0 654 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 STRBPQ96SI9 672 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 MTA3Q9BTC8 594 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 NACAP1Q9BZK3 213 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 CNNM2Q9H8M5 875 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 RTEL1Q9NZ71 1219 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 IFNKQ9P0W0 207 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 PNPLA7Q6ZV29 1317 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 MYO1BO43795 1136 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 CDKL5O76039 1030 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 SMC2O95347 1197 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 CTDNEP1O95476 244 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 NLRP12P59046 1061 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 RASGRF1Q13972 1273 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 UBE4AQ14139 1066 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 TRIM65Q6PJ69 517 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 GPR161Q8N6U8 529 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 SDF4Q9BRK5 362 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 TMX1Q9H3N1 280 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 EFCC1Q9HA90 598 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 CWC15Q9P013 229 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-201ENST00000261007 NHSQ6T4R5 1651 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 KLF18A0A0U1RQI7 1052 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 CPLX1O14810 134 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 ZSCAN12O43309 604 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 APPP05067 770 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 ME1P48163 572 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 HAND2P61296 217 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 CCT2P78371 535 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 CHRNDQ07001 517 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms