RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 FAM193AP78312 1265 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 POSTNQ15063 836 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 ARMCX5Q6P1M9 558 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 CATIPQ7Z7H3 387 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 DZIP3Q86Y13 1208 aaKnown RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 KRT23Q9C075 422 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 GNL3LQ9NVN8 582 aaKnown RBP5.42□□□□□ -1.54
USP44-201ENST00000258499 VPS54Q9P1Q0 977 aa5.42□□□□□ -1.54
USP44-201ENST00000258499 UBE2Q2LH0YL09 131 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 PRKAB2O43741 272 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 CUTAO60888 179 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 RHOXF2BP0C7M4 288 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 MCAMP43121 646 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 PPP2R3AQ06190 1150 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 ZNF569Q5MCW4 686 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 RRAGBQ5VZM2 374 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 E4F1Q66K89 784 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 TBC1D10CQ8IV04 446 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 NUTM2AQ8IVF1 878 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 CTCFLQ8NI51 663 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 ANKRD7Q92527 254 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 DPF2Q92785 391 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 TMEM87BQ96K49 555 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 PLIN2Q99541 437 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 RHOXF2Q9BQY4 288 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 RNF41Q9H4P4 317 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 ZMYM6O95789 1325 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 COL15A1P39059 1388 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 ARHGAP6O43182 974 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 CTIFO43310 598 aaKnown RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 CCDC175P0C221 793 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 IFIT1BQ5T764 474 aaKnown RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 KRBA2Q6ZNG9 492 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 CYB5R4Q7L1T6 521 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 NOSTRINQ8IVI9 506 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 SMYD4Q8IYR2 804 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 IGSF22Q8N9C0 903 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 ENGASEQ8NFI3 743 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 SDR42E1Q8WUS8 393 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 ACSBG1Q96GR2 724 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 CNNM2Q9H8M5 875 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 SENP2Q9HC62 589 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 GPR108Q9NPR9 543 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 PIH1D3Q9NQM4 214 aaKnown RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.41□□□□□ -1.54
USP44-201ENST00000258499 MAGEC2Q9UBF1 373 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 DDX41Q9UJV9 622 aaKnown RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 V9GY48 417 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 CASP1P29466 404 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 CDC27P30260 824 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 EIF5P55010 431 aaKnown RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 GABPB1Q06547 395 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 RBM43Q6ZSC3 357 aaKnown RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 MB21D2Q8IYB1 491 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 ZBTB38Q8NAP3 1195 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 ESR2Q92731 530 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 EEF2KMTQ96G04 330 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 AK7Q96M32 723 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 TEX13AQ9BXU3 409 aaPredicted RBP5.41□□□□□ -1.54
USP44-201ENST00000258499 VPS16Q9H269 839 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 ZSWIM5Q9P217 1185 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 PPP2R2CQ9Y2T4 447 aa5.41□□□□□ -1.54
USP44-201ENST00000258499 HEG1Q9ULI3 1381 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 MCM7P33993 719 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 CLCN6P51797 869 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 RILPL1Q5EBL4 403 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 SPECC1LQ69YQ0 1117 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 KIAA1328Q86T90 577 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 GPIHBP1Q8IV16 184 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 IFNL3Q8IZI9 196 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 SPATA5Q8NB90 893 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 TRIM34Q9BYJ4 488 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 PLSCR2Q9NRY7 297 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 NCAPD2Q15021 1401 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 PEAK1Q9H792 1746 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 PSDA5PKW4 1024 aaPredicted RBP5.4□□□□□ -1.54
USP44-201ENST00000258499 GOLGA6L9A6NEM1 432 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 AKR1B15C9JRZ8 316 aaPredicted RBP5.4□□□□□ -1.54
USP44-201ENST00000258499 ERLIN1O75477 346 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 CIAO1O76071 339 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 ADD2P35612 726 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 BCAMP50895 628 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 CTSWP56202 376 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 ANTXR2P58335 489 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 PUM3Q15397 648 aaKnown RBP5.4□□□□□ -1.54
USP44-201ENST00000258499 HLFQ16534 295 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 AKNAD1Q5T1N1 836 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 UTP14CQ5TAP6 766 aaKnown RBP5.4□□□□□ -1.54
USP44-201ENST00000258499 KANK3Q6NY19 840 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 SHC4Q6S5L8 630 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 LEKR1Q6ZMV7 388 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 CCDC47Q96A33 483 aaKnown RBP5.4□□□□□ -1.54
USP44-201ENST00000258499 TIGD1Q96MW7 591 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.4□□□□□ -1.54
USP44-201ENST00000258499 SRRTQ9BXP5 876 aaKnown RBP5.4□□□□□ -1.54
USP44-201ENST00000258499 BLZF1Q9H2G9 400 aa5.4□□□□□ -1.54
USP44-201ENST00000258499 SAMSN1Q9NSI8 373 aaKnown RBP5.4□□□□□ -1.54
USP44-201ENST00000258499 TSPY2A6NKD2 308 aa5.4□□□□□ -1.55
USP44-201ENST00000258499 SH2B2O14492 632 aaPredicted RBP5.4□□□□□ -1.55
USP44-201ENST00000258499 PDE8BO95263 885 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms