RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 CDC27P30260 824 aa16.91■□□□□ 0.3
MSI1-201ENST00000257552 CASP7P55210 303 aa16.91■□□□□ 0.3
MSI1-201ENST00000257552 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
MSI1-201ENST00000257552 TFRCP02786 760 aaKnown RBP16.91■□□□□ 0.3
MSI1-201ENST00000257552 FOXO4P98177 505 aa16.91■□□□□ 0.3
MSI1-201ENST00000257552 SPECC1Q5M775 1068 aa16.91■□□□□ 0.3
MSI1-201ENST00000257552 STK11IPQ8N1F8 1099 aa16.91■□□□□ 0.3
MSI1-201ENST00000257552 A0A0U1RQJ8 604 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
MSI1-201ENST00000257552 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
MSI1-201ENST00000257552 FOXN1O15353 648 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 DHX16O60231 1041 aaKnown RBP16.9■□□□□ 0.3
MSI1-201ENST00000257552 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 SKIDA1Q1XH10 827 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
MSI1-201ENST00000257552 FOXP4Q8IVH2 680 aaPredicted RBP16.9■□□□□ 0.3
MSI1-201ENST00000257552 ATRIPQ8WXE1 791 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 MRPL44Q9H9J2 332 aaKnown RBP16.9■□□□□ 0.3
MSI1-201ENST00000257552 PAG1Q9NWQ8 432 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 SHC4Q6S5L8 630 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 TRMT44Q8IYL2 757 aaKnown RBP16.9■□□□□ 0.3
MSI1-201ENST00000257552 PCDHA5Q9Y5H7 936 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 MRC1P22897 1456 aa16.9■□□□□ 0.3
MSI1-201ENST00000257552 KIF23Q02241 960 aaPredicted RBP16.89■□□□□ 0.3
MSI1-201ENST00000257552 NKX1-1Q15270 411 aaPredicted RBP16.89■□□□□ 0.3
MSI1-201ENST00000257552 TC2NQ8N9U0 490 aa16.89■□□□□ 0.3
MSI1-201ENST00000257552 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.3
MSI1-201ENST00000257552 ATG3Q9NT62 314 aa16.89■□□□□ 0.3
MSI1-201ENST00000257552 TUBE1Q9UJT0 475 aa16.89■□□□□ 0.3
MSI1-201ENST00000257552 CCDC151A5D8V7 595 aa16.89■□□□□ 0.29
MSI1-201ENST00000257552 IRX3P78415 501 aaPredicted RBP16.89■□□□□ 0.29
MSI1-201ENST00000257552 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
MSI1-201ENST00000257552 LONRF3Q496Y0 759 aa16.89■□□□□ 0.29
MSI1-201ENST00000257552 CPLX3Q8WVH0 158 aa16.89■□□□□ 0.29
MSI1-201ENST00000257552 FAN1Q9Y2M0 1017 aa16.89■□□□□ 0.29
MSI1-201ENST00000257552 RHOXF2BP0C7M4 288 aa16.89■□□□□ 0.29
MSI1-201ENST00000257552 ZNF827Q17R98 1081 aa16.89■□□□□ 0.29
MSI1-201ENST00000257552 BRAPQ7Z569 592 aa16.89■□□□□ 0.29
MSI1-201ENST00000257552 RHOXF2Q9BQY4 288 aa16.89■□□□□ 0.29
MSI1-201ENST00000257552 H7C1W4 665 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 RXRAP19793 462 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 NOP2P46087 812 aaKnown RBP16.88■□□□□ 0.29
MSI1-201ENST00000257552 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 JAKMIP3Q5VZ66 844 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 CNNM3Q8NE01 707 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 ACSBG1Q96GR2 724 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 PNKPQ96T60 521 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 PLEKHA4Q9H4M7 779 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 GOLGA6L9A6NEM1 432 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 SOWAHDA6NJG2 315 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 PRC1O43663 620 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 BMP6P22004 513 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 METTL16Q86W50 562 aaKnown RBP16.88■□□□□ 0.29
MSI1-201ENST00000257552 MAST3O60307 1309 aa16.88■□□□□ 0.29
MSI1-201ENST00000257552 MAP2K7O14733 419 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 STX10O60499 249 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 HLFQ16534 295 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 CCDC102AQ96A19 550 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 EFCC1Q9HA90 598 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 HELLSQ9NRZ9 838 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 NFE2L3Q9Y4A8 694 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 M0R2C6 588 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 PIP4K2BP78356 416 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 SPECC1LQ69YQ0 1117 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 ANKZF1Q9H8Y5 726 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 ABCB6Q9NP58 842 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
MSI1-201ENST00000257552 BRD3Q15059 726 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 ZMYM1Q5SVZ6 1142 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 BEND6Q5SZJ8 279 aaPredicted RBP16.86■□□□□ 0.29
MSI1-201ENST00000257552 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 PSD3Q9NYI0 1048 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 CUTAO60888 179 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.29
MSI1-201ENST00000257552 ATG9AQ7Z3C6 839 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 SRGAP1Q7Z6B7 1085 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 ABCC6O95255 1503 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 TBX2Q13207 712 aaPredicted RBP16.86■□□□□ 0.29
MSI1-201ENST00000257552 WASHC4Q2M389 1173 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 HDXQ7Z353 690 aa16.86■□□□□ 0.29
MSI1-201ENST00000257552 EXOC5O00471 708 aa16.85■□□□□ 0.29
MSI1-201ENST00000257552 FKBP4Q02790 459 aaKnown RBP eCLIP16.85■□□□□ 0.29
MSI1-201ENST00000257552 CCDC102BQ68D86 513 aa16.85■□□□□ 0.29
MSI1-201ENST00000257552 VPS37DQ86XT2 251 aa16.85■□□□□ 0.29
MSI1-201ENST00000257552 GOLGB1Q14789 3259 aaKnown RBP16.85■□□□□ 0.29
MSI1-201ENST00000257552 GTF2A1P52655 376 aaPredicted RBP16.85■□□□□ 0.29
MSI1-201ENST00000257552 KIF4BQ2VIQ3 1234 aa16.85■□□□□ 0.29
MSI1-201ENST00000257552 ZNF569Q5MCW4 686 aa16.85■□□□□ 0.29
MSI1-201ENST00000257552 OSBP2Q969R2 916 aa16.85■□□□□ 0.29
MSI1-201ENST00000257552 SAMSN1Q9NSI8 373 aaKnown RBP16.85■□□□□ 0.29
MSI1-201ENST00000257552 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
MSI1-201ENST00000257552 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
MSI1-201ENST00000257552 CHMP4CQ96CF2 233 aa16.84■□□□□ 0.29
MSI1-201ENST00000257552 ALG1Q9BT22 464 aa16.84■□□□□ 0.29
MSI1-201ENST00000257552 TOMM22Q9NS69 142 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms