RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 CTAGE8P0CG41 777 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 ATP1A3P13637 1013 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 KRT2P35908 639 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 CCDC152Q4G0S7 254 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 SPECC1LQ69YQ0 1117 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 CTAGE6Q86UF2 777 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 CTAGE4Q8IX94 777 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 TSPY2A6NKD2 308 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 CYP27B1O15528 508 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 UBA7P41226 1012 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 SLC4A8Q2Y0W8 1093 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 APOA5Q6Q788 366 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 NOSTRINQ8IVI9 506 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 CEP112Q8N8E3 955 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 TANGO6Q9C0B7 1094 aa11.47□□□□□ -0.57
SEMA6A-201ENST00000257414 CCT6AP40227 531 aaKnown RBP11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 EPS15P42566 896 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 TXLNBQ8N3L3 684 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 IL17RAQ96F46 866 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 CDC5LQ99459 802 aaKnown RBP11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 RTL9Q8NET4 1388 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 VWA3AA6NCI4 1184 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 ERVV-2B6SEH9 535 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 EXOC5O00471 708 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 IKBKBO14920 756 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 FBXO38Q6PIJ6 1188 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 PYM1Q9BRP8 204 aaKnown RBP11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 DESI2Q9BSY9 194 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 MKNK2Q9HBH9 465 aa11.46□□□□□ -0.57
SEMA6A-201ENST00000257414 MAGEB6P1A0A0J9YX57 407 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 G3V3G9 751 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 ZNF174Q15697 407 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 MAP9Q49MG5 647 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 IQCEQ6IPM2 695 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 DHX40Q8IX18 779 aaKnown RBP11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 CMTR1Q8N1G2 835 aaKnown RBP11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 TRIM47Q96LD4 638 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 ZNF652Q9Y2D9 606 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 PPP2R2CQ9Y2T4 447 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 USP5P45974 858 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 RABL6Q3YEC7 729 aaPredicted RBP11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 AKNAD1Q5T1N1 836 aa11.46□□□□□ -0.58
SEMA6A-201ENST00000257414 UTYO14607 1347 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 SYNRGQ9UMZ2 1314 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 MYO1BO43795 1136 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 PCCAP05165 728 aaPredicted RBP11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 RHOXF2BP0C7M4 288 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 STAT6P42226 847 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 SPA17Q15506 151 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 LPIN2Q92539 896 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 RHOXF2Q9BQY4 288 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 RMND1Q9NWS8 449 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 PDE8AO60658 829 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 KIF5BP33176 963 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 MTIF2P46199 727 aaKnown RBP11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 EXOSC10Q01780 885 aaKnown RBP11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 PDIA6Q15084 440 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 CNGA4Q8IV77 575 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 SPATA5Q8NB90 893 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 hCG_1642624A0A1W2PR95 340 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 FKBP15Q5T1M5 1219 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 DZIP1Q86YF9 867 aaKnown RBP11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 ZBTB38Q8NAP3 1195 aaPredicted RBP11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 HEG1Q9ULI3 1381 aa11.45□□□□□ -0.58
SEMA6A-201ENST00000257414 RIMS1Q86UR5 1692 aaKnown RBP11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 PPP6R2O75170 966 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 PHKA1P46020 1223 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 IFNL3Q8IZI9 196 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 IQUBQ8NA54 791 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 STAMQ92783 540 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 GREM2Q9H772 168 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 PATL2C9JE40 543 aaKnown RBP11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 SSBP05455 408 aaKnown RBP eCLIP11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 MCM7P33993 719 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 ANKRD7Q92527 254 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 VPS16Q9H269 839 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 ATG3Q9NT62 314 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 CTNND2Q9UQB3 1225 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 V9GY48 417 aaPredicted RBP11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 PRDM1O75626 825 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 CTSWP56202 376 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 CHMP4BP1P59074 171 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 ZFP91Q96JP5 570 aaPredicted RBP11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 OSBPL5Q9H0X9 879 aaPredicted RBP11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 PODXL2Q9NZ53 605 aa11.44□□□□□ -0.58
SEMA6A-201ENST00000257414 TRIM21P19474 475 aaKnown RBP11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 PDE4BQ07343 736 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 VPS54Q9P1Q0 977 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 GUCA1BQ9UMX6 200 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 MON2Q7Z3U7 1717 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 CTDNEP1O95476 244 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 MCM3P25205 808 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 UBE3CQ15386 1083 aa11.43□□□□□ -0.58
SEMA6A-201ENST00000257414 ATG9AQ7Z3C6 839 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms