RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 CAPNS2Q96L46 248 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 TMEM39BQ9GZU3 492 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 TMOD2Q9NZR1 351 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 DOCK2Q92608 1830 aa10.4□□□□□ -0.75
TMEM258-201ENST00000257262 SSC5DA1L4H1 1573 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 MAST2Q6P0Q8 1798 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 GPR75-ASB3A0A0A6YYF3 556 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 POTEFA5A3E0 1075 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 AOC2O75106 756 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 USP2O75604 605 aaPredicted RBP10.39□□□□□ -0.75
TMEM258-201ENST00000257262 ECE1P42892 770 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 ZNF157P51786 506 aaPredicted RBP10.39□□□□□ -0.75
TMEM258-201ENST00000257262 NFIAQ12857 509 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
TMEM258-201ENST00000257262 FAM83AQ86UY5 434 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.39□□□□□ -0.75
TMEM258-201ENST00000257262 FAM151AQ8WW52 585 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 FAM198AQ9UFP1 575 aa10.39□□□□□ -0.75
TMEM258-201ENST00000257262 ANGEL1Q9UNK9 670 aaKnown RBP10.39□□□□□ -0.75
TMEM258-201ENST00000257262 PCNTO95613 3336 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 PPP1R12BO60237 982 aaPredicted RBP10.38□□□□□ -0.75
TMEM258-201ENST00000257262 IDH1O75874 414 aaKnown RBP10.38□□□□□ -0.75
TMEM258-201ENST00000257262 PLCG2P16885 1265 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 ATP5JP18859 108 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 TCP10Q12799 353 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 NAA16Q6N069 864 aaPredicted RBP10.38□□□□□ -0.75
TMEM258-201ENST00000257262 ARMC9Q7Z3E5 817 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 ADGRA1Q86SQ6 560 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 ZFPM1Q8IX07 1006 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 OTUD5Q96G74 571 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 DNAJC2Q99543 621 aaKnown RBP10.38□□□□□ -0.75
TMEM258-201ENST00000257262 BOLA2Q9H3K6 86 aa10.38□□□□□ -0.75
TMEM258-201ENST00000257262 COLQQ9Y215 455 aaPredicted RBP10.38□□□□□ -0.75
TMEM258-201ENST00000257262 THSD7BQ9C0I4 1608 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 AK9Q5TCS8 1911 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 FAM155AB1AL88 458 aaPredicted RBP10.37□□□□□ -0.75
TMEM258-201ENST00000257262 GOLIM4O00461 696 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 IGSF3O75054 1194 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 IGHDP01880 384 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 MAP2K2P36507 400 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 RGS3P49796 1198 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 RHBDL3P58872 404 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 PICALMQ13492 652 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 TTF1Q15361 905 aaPredicted RBP10.37□□□□□ -0.75
TMEM258-201ENST00000257262 MAP3K11Q16584 847 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 LDLRAD1Q5T700 205 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 ANKRD45Q5TZF3 282 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 GCC1Q96CN9 775 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 EDC3Q96F86 508 aaKnown RBP10.37□□□□□ -0.75
TMEM258-201ENST00000257262 ZIC5Q96T25 663 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 IDI2Q9BXS1 227 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 RWDD1Q9H446 243 aaPredicted RBP10.37□□□□□ -0.75
TMEM258-201ENST00000257262 SCUBE2Q9NQ36 999 aa10.37□□□□□ -0.75
TMEM258-201ENST00000257262 AATFQ9NY61 560 aaKnown RBP eCLIP10.37□□□□□ -0.75
TMEM258-201ENST00000257262 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.37□□□□□ -0.75
TMEM258-201ENST00000257262 CDK5RAP2Q96SN8 1893 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 ENTPD3O75355 529 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 WDHD1O75717 1129 aaPredicted RBP10.36□□□□□ -0.75
TMEM258-201ENST00000257262 SLC10A3P09131 477 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 CYP7A1P22680 504 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 MAP3K12Q12852 859 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
TMEM258-201ENST00000257262 MAGEB6Q8N7X4 407 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 SH3RF3Q8TEJ3 882 aaPredicted RBP10.36□□□□□ -0.75
TMEM258-201ENST00000257262 HAUS7Q99871 368 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 NOL10Q9BSC4 688 aaKnown RBP10.36□□□□□ -0.75
TMEM258-201ENST00000257262 DDX4Q9NQI0 724 aaKnown RBP10.36□□□□□ -0.75
TMEM258-201ENST00000257262 ECHDC1Q9NTX5 307 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 PAG1Q9NWQ8 432 aa10.36□□□□□ -0.75
TMEM258-201ENST00000257262 OTOFQ9HC10 1997 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 BAG3O95817 575 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 MAP4K4O95819 1239 aaPredicted RBP10.35□□□□□ -0.75
TMEM258-201ENST00000257262 HSPA1AP0DMV8 641 aaKnown RBP10.35□□□□□ -0.75
TMEM258-201ENST00000257262 HSPA1BP0DMV9 641 aaKnown RBP10.35□□□□□ -0.75
TMEM258-201ENST00000257262 IREB2P48200 963 aaKnown RBP10.35□□□□□ -0.75
TMEM258-201ENST00000257262 PPP4CP60510 307 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 DYNLL1P63167 89 aaKnown RBP10.35□□□□□ -0.75
TMEM258-201ENST00000257262 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
TMEM258-201ENST00000257262 KIF23Q02241 960 aaPredicted RBP10.35□□□□□ -0.75
TMEM258-201ENST00000257262 NOGQ13253 232 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 SLC9C2Q5TAH2 1124 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 TSHZ3Q63HK5 1081 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 MIGA2Q7L4E1 593 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 SH3BP5LQ7L8J4 393 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 RASAL3Q86YV0 1011 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 ANKRD13AQ8IZ07 590 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 SLC10A4Q96EP9 437 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 CLMNQ96JQ2 1002 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 WBP1LQ9NX94 342 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 RFX7Q2KHR2 1363 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 RPAP1Q9BWH6 1393 aaPredicted RBP10.35□□□□□ -0.75
TMEM258-201ENST00000257262 FOCADQ5VW36 1801 aa10.35□□□□□ -0.75
TMEM258-201ENST00000257262 DDTLA6NHG4 134 aaPredicted RBP10.34□□□□□ -0.75
TMEM258-201ENST00000257262 UNCXA6NJT0 531 aa10.34□□□□□ -0.75
TMEM258-201ENST00000257262 MAP2K1Q02750 393 aaPredicted RBP10.34□□□□□ -0.75
TMEM258-201ENST00000257262 B4GALNT3Q6L9W6 998 aa10.34□□□□□ -0.75
TMEM258-201ENST00000257262 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.34□□□□□ -0.75
TMEM258-201ENST00000257262 ZSCAN29Q8IWY8 852 aaPredicted RBP10.34□□□□□ -0.75
TMEM258-201ENST00000257262 SMC5Q8IY18 1101 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms