RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ZKSCAN3Q9BRR0 538 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 KRT23Q9C075 422 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 KCNQ5Q9NR82 932 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 ANAPC4Q9UJX5 808 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 C21orf2O43822 256 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 CTDNEP1O95476 244 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 LDHCP07864 332 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 CYP2D6P10635 497 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 EVCP57679 992 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 GIMAP6Q6P9H5 292 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 CERS5Q8N5B7 392 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 ANGEL1Q9UNK9 670 aaKnown RBP22.22■■□□□ 1.15
TRIM47-201ENST00000254816 ATF5Q9Y2D1 282 aaPredicted RBP22.22■■□□□ 1.15
TRIM47-201ENST00000254816 ADAMTSL1Q8N6G6 1762 aa22.21■■□□□ 1.15
TRIM47-201ENST00000254816 PTMSP20962 102 aa22.21■■□□□ 1.15
TRIM47-201ENST00000254816 BTDP43251 543 aa22.21■■□□□ 1.15
TRIM47-201ENST00000254816 LARP1BQ659C4 914 aaKnown RBP22.21■■□□□ 1.15
TRIM47-201ENST00000254816 IGDCC4Q8TDY8 1250 aa22.21■■□□□ 1.15
TRIM47-201ENST00000254816 ATP8A2Q9NTI2 1148 aa22.21■■□□□ 1.15
TRIM47-201ENST00000254816 KIF13BQ9NQT8 1826 aa22.21■■□□□ 1.15
TRIM47-201ENST00000254816 GOLGA8BA8MQT2 603 aa22.2■■□□□ 1.15
TRIM47-201ENST00000254816 BAG3O95817 575 aa22.2■■□□□ 1.15
TRIM47-201ENST00000254816 ZSCAN22P10073 491 aaPredicted RBP22.2■■□□□ 1.15
TRIM47-201ENST00000254816 NOL10Q9BSC4 688 aaKnown RBP22.2■■□□□ 1.15
TRIM47-201ENST00000254816 RNF41Q9H4P4 317 aaPredicted RBP22.2■■□□□ 1.15
TRIM47-201ENST00000254816 VPS37CA5D8V6 355 aaPredicted RBP22.2■■□□□ 1.14
TRIM47-201ENST00000254816 USP17L8P0C7I0 530 aa22.2■■□□□ 1.14
TRIM47-201ENST00000254816 USP5P45974 858 aa22.2■■□□□ 1.14
TRIM47-201ENST00000254816 NSUN7Q8NE18 718 aaKnown RBP22.2■■□□□ 1.14
TRIM47-201ENST00000254816 HPS5Q9UPZ3 1129 aa22.2■■□□□ 1.14
TRIM47-201ENST00000254816 MTMR6Q9Y217 621 aa22.2■■□□□ 1.14
TRIM47-201ENST00000254816 IGSF3O75054 1194 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 PRDM1O75626 825 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 DPEP1P16444 411 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 PPP4CP60510 307 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 TMEM67Q5HYA8 995 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 TGFBRAP1Q8WUH2 860 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 TMEM87BQ96K49 555 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 LY9Q9HBG7 655 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 IFIT3O14879 490 aaKnown RBP22.19■■□□□ 1.14
TRIM47-201ENST00000254816 ILDR1Q86SU0 546 aaPredicted RBP22.19■■□□□ 1.14
TRIM47-201ENST00000254816 MCM9Q9NXL9 1143 aa22.19■■□□□ 1.14
TRIM47-201ENST00000254816 SNED1Q8TER0 1413 aa22.18■■□□□ 1.14
TRIM47-201ENST00000254816 RXRAP19793 462 aa22.18■■□□□ 1.14
TRIM47-201ENST00000254816 KCNA3P22001 575 aa22.18■■□□□ 1.14
TRIM47-201ENST00000254816 AOC3Q16853 763 aa22.18■■□□□ 1.14
TRIM47-201ENST00000254816 SMARCC2Q8TAQ2 1214 aa22.18■■□□□ 1.14
TRIM47-201ENST00000254816 ZNF646O15015 1829 aaPredicted RBP22.18■■□□□ 1.14
TRIM47-201ENST00000254816 GPR75-ASB3A0A0A6YYF3 556 aa22.18■■□□□ 1.14
TRIM47-201ENST00000254816 PTPDC1A2A3K4 754 aa22.18■■□□□ 1.14
TRIM47-201ENST00000254816 GAS2L3Q86XJ1 694 aa22.18■■□□□ 1.14
TRIM47-201ENST00000254816 F13A1P00488 732 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 NFXL1Q6ZNB6 911 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 TTLL6Q8N841 843 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 LLPHQ9BRT6 129 aaKnown RBP22.17■■□□□ 1.14
TRIM47-201ENST00000254816 GRPEL1Q9HAV7 217 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 ARPP21Q9UBL0 812 aaPredicted RBP22.17■■□□□ 1.14
TRIM47-201ENST00000254816 MKRN1Q9UHC7 482 aaKnown RBP22.17■■□□□ 1.14
TRIM47-201ENST00000254816 DDX49Q9Y6V7 483 aaKnown RBP22.17■■□□□ 1.14
TRIM47-201ENST00000254816 MYH1P12882 1939 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 ECE2O60344 883 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 MRE11P49959 708 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 CDC37L1Q7L3B6 337 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 MAPKAPK5Q8IW41 473 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 MYL10Q9BUA6 226 aa22.17■■□□□ 1.14
TRIM47-201ENST00000254816 FOCADQ5VW36 1801 aa22.16■■□□□ 1.14
TRIM47-201ENST00000254816 FOSBP53539 338 aa22.16■■□□□ 1.14
TRIM47-201ENST00000254816 R3HDM1Q15032 1099 aaKnown RBP22.16■■□□□ 1.14
TRIM47-201ENST00000254816 PODNQ7Z5L7 613 aa22.16■■□□□ 1.14
TRIM47-201ENST00000254816 TTF2Q9UNY4 1162 aaKnown RBP22.16■■□□□ 1.14
TRIM47-201ENST00000254816 SCNN1DP51172 638 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 SBK1Q52WX2 424 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 CCDC144CPQ8IYA2 1237 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 ESR2Q92731 530 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 DAGLAQ9Y4D2 1042 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 GAKO14976 1311 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 RANBP6O60518 1105 aaKnown RBP22.15■■□□□ 1.14
TRIM47-201ENST00000254816 APOA5Q6Q788 366 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 SLF2Q8IX21 1173 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 FAM184AQ8NB25 1140 aa22.15■■□□□ 1.14
TRIM47-201ENST00000254816 FAM163AQ96GL9 167 aaPredicted RBP22.15■■□□□ 1.14
TRIM47-201ENST00000254816 SAP30BPQ9UHR5 308 aaKnown RBP22.15■■□□□ 1.14
TRIM47-201ENST00000254816 PDCP20941 246 aa22.14■■□□□ 1.14
TRIM47-201ENST00000254816 MICU3Q86XE3 530 aa22.14■■□□□ 1.14
TRIM47-201ENST00000254816 TEX11Q8IYF3 940 aa22.14■■□□□ 1.14
TRIM47-201ENST00000254816 PRPF40AO75400 957 aaKnown RBP22.14■■□□□ 1.13
TRIM47-201ENST00000254816 RHBDL3P58872 404 aa22.14■■□□□ 1.13
TRIM47-201ENST00000254816 FERMT3Q86UX7 667 aa22.14■■□□□ 1.13
TRIM47-201ENST00000254816 LMBRD1Q9NUN5 540 aa22.14■■□□□ 1.13
TRIM47-201ENST00000254816 CCDC69A6NI79 296 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 FGRP09769 529 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 LIFRP42702 1097 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 METAP2P50579 478 aaKnown RBP eCLIP22.13■■□□□ 1.13
TRIM47-201ENST00000254816 WTAPQ15007 396 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 KLHL40Q2TBA0 621 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 CC2D2BQ6DHV5 1058 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 SGMS1Q86VZ5 419 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 GDPD2Q9HCC8 539 aa22.13■■□□□ 1.13
TRIM47-201ENST00000254816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.13■■□□□ 1.13
TRIM47-201ENST00000254816 DDX60LQ5H9U9 1706 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms