RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 WTAPQ15007 396 aa13.65□□□□□ -0.22
LIN28A-201ENST00000254231 SNX21Q969T3 373 aa13.65□□□□□ -0.22
LIN28A-201ENST00000254231 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
LIN28A-201ENST00000254231 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.23
LIN28A-201ENST00000254231 ECE2O60344 883 aa13.65□□□□□ -0.23
LIN28A-201ENST00000254231 NFIAQ12857 509 aa13.65□□□□□ -0.23
LIN28A-201ENST00000254231 SART3Q15020 963 aaKnown RBP13.65□□□□□ -0.23
LIN28A-201ENST00000254231 JDP2Q8WYK2 163 aa13.65□□□□□ -0.23
LIN28A-201ENST00000254231 FBXO3Q9UK99 471 aa13.65□□□□□ -0.23
LIN28A-201ENST00000254231 TSPY3P0CV98 308 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 TSPY8P0CW00 308 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 UBE3CQ15386 1083 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
LIN28A-201ENST00000254231 TBC1D10BQ4KMP7 808 aaPredicted RBP13.64□□□□□ -0.23
LIN28A-201ENST00000254231 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 WDR66Q8TBY9 1149 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 KCNJ14Q9UNX9 436 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 LEMD3Q9Y2U8 911 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 ATP6V0A2Q9Y487 856 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 ANAPC15P60006 121 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 ISM2Q6H9L7 571 aa13.64□□□□□ -0.23
LIN28A-201ENST00000254231 GADD45BO75293 160 aaPredicted RBP13.63□□□□□ -0.23
LIN28A-201ENST00000254231 GDF11O95390 407 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 MKRN3Q13064 507 aaKnown RBP13.63□□□□□ -0.23
LIN28A-201ENST00000254231 OGFOD1Q8N543 542 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 BICD2Q8TD16 824 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 A0A087WWV3 80 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 NUCB2P80303 420 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 AKNAD1Q5T1N1 836 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 IFIT1BQ5T764 474 aaKnown RBP13.63□□□□□ -0.23
LIN28A-201ENST00000254231 NUP98P52948 1817 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 FOXP2O15409 715 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 ZBTB43O43298 467 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 LRRC47Q8N1G4 583 aaKnown RBP13.63□□□□□ -0.23
LIN28A-201ENST00000254231 DSCC1Q9BVC3 393 aa13.63□□□□□ -0.23
LIN28A-201ENST00000254231 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 BTAF1O14981 1849 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 LAMA2P24043 3122 aaKnown RBP13.62□□□□□ -0.23
LIN28A-201ENST00000254231 SHANK3Q9BYB0 1731 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
LIN28A-201ENST00000254231 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 SPECC1Q5M775 1068 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 UBA5Q9GZZ9 404 aa13.62□□□□□ -0.23
LIN28A-201ENST00000254231 DCP1AQ9NPI6 582 aaPredicted RBP13.62□□□□□ -0.23
LIN28A-201ENST00000254231 MCM2P49736 904 aa13.61□□□□□ -0.23
LIN28A-201ENST00000254231 EAPPQ56P03 285 aaPredicted RBP13.61□□□□□ -0.23
LIN28A-201ENST00000254231 SAMD7Q7Z3H4 446 aa13.61□□□□□ -0.23
LIN28A-201ENST00000254231 MKI67P46013 3256 aaKnown RBP13.61□□□□□ -0.23
LIN28A-201ENST00000254231 TNKSO95271 1327 aa13.61□□□□□ -0.23
LIN28A-201ENST00000254231 SIPA1L3O60292 1781 aaPredicted RBP13.61□□□□□ -0.23
LIN28A-201ENST00000254231 MARCKSP29966 332 aaPredicted RBP13.61□□□□□ -0.23
LIN28A-201ENST00000254231 PDIA3P30101 505 aaKnown RBP13.61□□□□□ -0.23
LIN28A-201ENST00000254231 GPCPD1Q9NPB8 672 aa13.61□□□□□ -0.23
LIN28A-201ENST00000254231 FRMPD2Q68DX3 1309 aaPredicted RBP13.61□□□□□ -0.23
LIN28A-201ENST00000254231 TTLL12Q14166 644 aaPredicted RBP13.6□□□□□ -0.23
LIN28A-201ENST00000254231 ANKRD1Q15327 319 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 CTR9Q6PD62 1173 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 ESR2Q92731 530 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 ZDHHC9Q9Y397 364 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 V9GY48 417 aaPredicted RBP13.6□□□□□ -0.23
LIN28A-201ENST00000254231 MED23Q9ULK4 1368 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 COL4A1P02462 1669 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 TAL1P17542 331 aaPredicted RBP13.6□□□□□ -0.23
LIN28A-201ENST00000254231 CPLX2Q6PUV4 134 aaKnown RBP13.6□□□□□ -0.23
LIN28A-201ENST00000254231 ILDR2Q71H61 639 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 SP8Q8IXZ3 490 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 C8orf76Q96K31 380 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 TTC14Q96N46 770 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 LDHCP07864 332 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 ANTXR2P58335 489 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 EYA3Q99504 573 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 ANGEL1Q9UNK9 670 aaKnown RBP13.6□□□□□ -0.23
LIN28A-201ENST00000254231 TACC3Q9Y6A5 838 aa13.6□□□□□ -0.23
LIN28A-201ENST00000254231 TCRBV5S4A2TA0A5A2 114 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 RBAK-RBAKDNI3L0D1 243 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 TRIM29Q14134 588 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 DALRD3Q5D0E6 543 aaKnown RBP13.59□□□□□ -0.23
LIN28A-201ENST00000254231 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
LIN28A-201ENST00000254231 ME1P48163 572 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 PDE4BQ07343 736 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 CCDC96Q2M329 555 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 SLC3A2P08195 630 aaKnown RBP13.59□□□□□ -0.23
LIN28A-201ENST00000254231 CDC27P30260 824 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 USP48Q86UV5 1035 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 CDAN1Q8IWY9 1227 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 TEKT1Q969V4 418 aa13.59□□□□□ -0.23
LIN28A-201ENST00000254231 COL22A1Q8NFW1 1626 aaPredicted RBP13.59□□□□□ -0.23
LIN28A-201ENST00000254231 SYCE3A1L190 88 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 SLC16A2P36021 539 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 GSE1Q14687 1217 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 CKAP2LQ8IYA6 745 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 TDRD7Q8NHU6 1098 aaKnown RBP13.58□□□□□ -0.24
LIN28A-201ENST00000254231 ALG1Q9BT22 464 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms