RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ZSWIM5Q9P217 1185 aa21.8■■□□□ 1.08
PDLIM4-201ENST00000253754 PCDHA7Q9UN72 937 aa21.8■■□□□ 1.08
PDLIM4-201ENST00000253754 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
PDLIM4-201ENST00000253754 A0A087WWV3 80 aa21.79■■□□□ 1.08
PDLIM4-201ENST00000253754 TMEM67Q5HYA8 995 aa21.79■■□□□ 1.08
PDLIM4-201ENST00000253754 ATL3Q6DD88 541 aa21.79■■□□□ 1.08
PDLIM4-201ENST00000253754 NFXL1Q6ZNB6 911 aa21.79■■□□□ 1.08
PDLIM4-201ENST00000253754 FSIP1Q8NA03 581 aa21.79■■□□□ 1.08
PDLIM4-201ENST00000253754 UBE2Q2LH0YL09 131 aa21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 TDO2P48775 406 aa21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 DDR1Q08345 913 aa21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 RRP12Q5JTH9 1297 aaKnown RBP21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 CAMKK2Q96RR4 588 aa21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 RTEL1Q9NZ71 1219 aa21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 ABCF2Q9UG63 623 aa21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 SPC24Q8NBT2 197 aa21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 ENGASEQ8NFI3 743 aa21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 COL1A1P02452 1464 aaPredicted RBP21.78■■□□□ 1.08
PDLIM4-201ENST00000253754 KIF23Q02241 960 aaPredicted RBP21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 MYSM1Q5VVJ2 828 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 CCDC73Q6ZRK6 1079 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 LINC00301Q8NCQ3 95 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 ERCC4Q92889 916 aaPredicted RBP21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 TMEM87BQ96K49 555 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 ZKSCAN3Q9BRR0 538 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 ZBTB43O43298 467 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 ST5P78524 1137 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 AKNAD1Q5T1N1 836 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 ALG1Q9BT22 464 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 TOMM22Q9NS69 142 aa21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 FAM217BQ9NTX9 383 aaPredicted RBP21.77■■□□□ 1.08
PDLIM4-201ENST00000253754 SMIM22K7EJ46 135 aa21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 POLRMTO00411 1230 aaKnown RBP21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 IFIT3O14879 490 aaKnown RBP21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 RANBP6O60518 1105 aaKnown RBP21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 CYP7A1P22680 504 aa21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 GOLGA8AA7E2F4 631 aa21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 ZNF165P49910 485 aa21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 FAM160A1Q05DH4 1040 aa21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 STK38Q15208 465 aa21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 C17orf53Q8N3J3 647 aaPredicted RBP21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 SDR42E1Q8WUS8 393 aa21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 PNPLA7Q6ZV29 1317 aa21.76■■□□□ 1.07
PDLIM4-201ENST00000253754 A0A1B0GVL5 298 aa21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 MFSD6Q6ZSS7 791 aa21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 ZNF804BA4D1E1 1349 aa21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 KINO60870 393 aaKnown RBP21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 KLRK1P26718 216 aa21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 NTRK3Q16288 839 aa21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 C11orf57Q6ZUT1 292 aaPredicted RBP21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 SGMS1Q86VZ5 419 aa21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 NLGN1Q8N2Q7 840 aa21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 RAI14Q9P0K7 980 aa21.75■■□□□ 1.07
PDLIM4-201ENST00000253754 KIAA2012Q0VF49 1180 aa21.74■■□□□ 1.07
PDLIM4-201ENST00000253754 UBE4AQ14139 1066 aa21.74■■□□□ 1.07
PDLIM4-201ENST00000253754 BRAPQ7Z569 592 aa21.74■■□□□ 1.07
PDLIM4-201ENST00000253754 FLAD1Q8NFF5 587 aa21.74■■□□□ 1.07
PDLIM4-201ENST00000253754 MRPS27Q92552 414 aaKnown RBP21.74■■□□□ 1.07
PDLIM4-201ENST00000253754 NACAP1Q9BZK3 213 aa21.74■■□□□ 1.07
PDLIM4-201ENST00000253754 A0A1B0GUL6 1792 aa21.74■■□□□ 1.07
PDLIM4-201ENST00000253754 BAG6P46379 1132 aa21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 NDUFA8P51970 172 aa21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 SF3A1Q15459 793 aaKnown RBP21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 KRT40Q6A162 431 aa21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 RPGRQ92834 1020 aaKnown RBP21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 PDGFDQ9GZP0 370 aaPredicted RBP21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 POLR3EQ9NVU0 708 aa21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 SLC12A7Q9Y666 1083 aa21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 GNAT2P19087 354 aa21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 FMR1NBQ8N0W7 255 aaPredicted RBP21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 R3HCC1Q9Y3T6 440 aaKnown RBP21.73■■□□□ 1.07
PDLIM4-201ENST00000253754 SPTLC2O15270 562 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 CDKL5O76039 1030 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 ADALQ6DHV7 355 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 VPS37DQ86XT2 251 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 TIAM2Q8IVF5 1701 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 STAG1Q8WVM7 1258 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 CNNM2Q9H8M5 875 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 CCDC69A6NI79 296 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 LIFRP42702 1097 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 GRAPQ13588 217 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 TDRD7Q8NHU6 1098 aaKnown RBP21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 GRAPLQ8TC17 118 aaPredicted RBP21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 KRT23Q9C075 422 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 KCNF1Q9H3M0 494 aa21.72■■□□□ 1.07
PDLIM4-201ENST00000253754 IARSP41252 1262 aaKnown RBP21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 SYNE3Q6ZMZ3 975 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 KCNG4Q8TDN1 519 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 FBXW7Q969H0 707 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 FAM84BQ96KN1 310 aaPredicted RBP21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 SLC26A6Q9BXS9 759 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 MINDY4BA8MYZ0 360 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 YEATS4O95619 227 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 DYNLL1P63167 89 aaKnown RBP21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 PPARAQ07869 468 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 CRY2Q49AN0 593 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 ANO1Q5XXA6 986 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 MSL1Q68DK7 614 aa21.71■■□□□ 1.07
PDLIM4-201ENST00000253754 CPLX2Q6PUV4 134 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms