RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 DAGLAQ9Y4D2 1042 aa12.88□□□□□ -0.35
VPS50-201ENST00000251739 CSADQ9Y600 493 aa12.88□□□□□ -0.35
VPS50-201ENST00000251739 ATRNL1Q5VV63 1379 aa12.88□□□□□ -0.35
VPS50-201ENST00000251739 PHIPQ8WWQ0 1821 aa12.88□□□□□ -0.35
VPS50-201ENST00000251739 PRDX5P30044 214 aa12.87□□□□□ -0.35
VPS50-201ENST00000251739 PPIL2Q13356 520 aa12.87□□□□□ -0.35
VPS50-201ENST00000251739 DIXDC1Q155Q3 683 aa12.87□□□□□ -0.35
VPS50-201ENST00000251739 INTS3Q68E01 1043 aaKnown RBP12.87□□□□□ -0.35
VPS50-201ENST00000251739 ERO1BQ86YB8 467 aa12.87□□□□□ -0.35
VPS50-201ENST00000251739 WRNIP1Q96S55 665 aa12.87□□□□□ -0.35
VPS50-201ENST00000251739 EFCC1Q9HA90 598 aa12.87□□□□□ -0.35
VPS50-201ENST00000251739 ZCCHC17Q9NP64 241 aaKnown RBP12.87□□□□□ -0.35
VPS50-201ENST00000251739 COPRSQ9NQ92 184 aa12.87□□□□□ -0.35
VPS50-201ENST00000251739 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
VPS50-201ENST00000251739 POTEB2H3BUK9 544 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 SEMA3EO15041 775 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 TAF1CQ15572 869 aaPredicted RBP12.86□□□□□ -0.35
VPS50-201ENST00000251739 CDC42EP5Q6NZY7 148 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 FAM151AQ8WW52 585 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 ZKSCAN4Q969J2 545 aaPredicted RBP12.86□□□□□ -0.35
VPS50-201ENST00000251739 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 MEIS3Q99687 375 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 API5Q9BZZ5 524 aaKnown RBP12.86□□□□□ -0.35
VPS50-201ENST00000251739 SIL1Q9H173 461 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 ZNF112Q9UJU3 913 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 NOB1Q9ULX3 412 aaKnown RBP12.86□□□□□ -0.35
VPS50-201ENST00000251739 LRRFIP2Q9Y608 721 aaKnown RBP12.86□□□□□ -0.35
VPS50-201ENST00000251739 MGAMO43451 1857 aa12.86□□□□□ -0.35
VPS50-201ENST00000251739 PDS5AQ29RF7 1337 aaKnown RBP12.86□□□□□ -0.35
VPS50-201ENST00000251739 BTBD19C9JJ37 291 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 IRF6O14896 467 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 CETPP11597 493 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 IL15P40933 162 aaPredicted RBP12.85□□□□□ -0.35
VPS50-201ENST00000251739 PHKA1P46020 1223 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 NFIAQ12857 509 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 MTX1Q13505 466 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 TMEM121BQ9BXQ6 578 aaPredicted RBP12.85□□□□□ -0.35
VPS50-201ENST00000251739 ZNF341Q9BYN7 854 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 ZFYVE28Q9HCC9 887 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 PA2G4Q9UQ80 394 aaKnown RBP12.85□□□□□ -0.35
VPS50-201ENST00000251739 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 GAKO14976 1311 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 ADGRA2Q96PE1 1338 aa12.85□□□□□ -0.35
VPS50-201ENST00000251739 TLR2O60603 784 aa12.84□□□□□ -0.35
VPS50-201ENST00000251739 INPP5BP32019 993 aa12.84□□□□□ -0.35
VPS50-201ENST00000251739 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
VPS50-201ENST00000251739 PPATQ06203 517 aa12.84□□□□□ -0.35
VPS50-201ENST00000251739 SNAPC2Q13487 334 aa12.84□□□□□ -0.35
VPS50-201ENST00000251739 MOGSQ13724 837 aa12.84□□□□□ -0.35
VPS50-201ENST00000251739 NOL9Q5SY16 702 aaKnown RBP12.84□□□□□ -0.35
VPS50-201ENST00000251739 ZNF333Q96JL9 665 aa12.84□□□□□ -0.35
VPS50-201ENST00000251739 KCNH4Q9UQ05 1017 aa12.84□□□□□ -0.35
VPS50-201ENST00000251739 CDK5RAP2Q96SN8 1893 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 LDHBP07195 334 aaKnown RBP12.83□□□□□ -0.36
VPS50-201ENST00000251739 ADORA1P30542 326 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 RASGRF1Q13972 1273 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 ARHGAP45Q92619 1136 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 GNL3LQ9NVN8 582 aaKnown RBP12.83□□□□□ -0.36
VPS50-201ENST00000251739 DENND2AQ9ULE3 1009 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 MAST2Q6P0Q8 1798 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 ATAD5Q96QE3 1844 aa12.83□□□□□ -0.36
VPS50-201ENST00000251739 CCDC102BQ68D86 513 aa12.82□□□□□ -0.36
VPS50-201ENST00000251739 MIGA2Q7L4E1 593 aa12.82□□□□□ -0.36
VPS50-201ENST00000251739 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
VPS50-201ENST00000251739 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
VPS50-201ENST00000251739 PTCH2Q9Y6C5 1203 aa12.82□□□□□ -0.36
VPS50-201ENST00000251739 LOC285556D6RIA3 1793 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 TRIOBPQ9H2D6 2365 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 FOCADQ5VW36 1801 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 LACTBP83111 547 aaPredicted RBP12.81□□□□□ -0.36
VPS50-201ENST00000251739 MAP3K10Q02779 954 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 TCP10Q12799 353 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 C17orf99Q6UX52 265 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 ANKRD23Q86SG2 305 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 ZFPM1Q8IX07 1006 aa12.81□□□□□ -0.36
VPS50-201ENST00000251739 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
VPS50-201ENST00000251739 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
VPS50-201ENST00000251739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.81□□□□□ -0.36
VPS50-201ENST00000251739 MYO5AQ9Y4I1 1855 aaKnown RBP12.8□□□□□ -0.36
VPS50-201ENST00000251739 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
VPS50-201ENST00000251739 DOCK3Q8IZD9 2030 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 ENTPD3O75355 529 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 WDHD1O75717 1129 aaPredicted RBP12.8□□□□□ -0.36
VPS50-201ENST00000251739 GNAI3P08754 354 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 RGS3P49796 1198 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 ARHGEF6Q15052 776 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 SH3BP5LQ7L8J4 393 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
VPS50-201ENST00000251739 ZNF384Q8TF68 577 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 USP40Q9NVE5 1235 aa12.8□□□□□ -0.36
VPS50-201ENST00000251739 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
VPS50-201ENST00000251739 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
VPS50-201ENST00000251739 GNRH1P01148 92 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms