RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ANO6Q4KMQ2 910 aa29.31■■■□□ 2.28
TMEM55B-201ENST00000250489 SASS6Q6UVJ0 657 aa29.31■■■□□ 2.28
TMEM55B-201ENST00000250489 IARSP41252 1262 aaKnown RBP29.3■■■□□ 2.28
TMEM55B-201ENST00000250489 FAM160A1Q05DH4 1040 aa29.3■■■□□ 2.28
TMEM55B-201ENST00000250489 STK36Q9NRP7 1315 aa29.3■■■□□ 2.28
TMEM55B-201ENST00000250489 CTAGE5O15320 804 aa29.3■■■□□ 2.28
TMEM55B-201ENST00000250489 AP5Z1O43299 807 aa29.3■■■□□ 2.28
TMEM55B-201ENST00000250489 STK38Q15208 465 aa29.3■■■□□ 2.28
TMEM55B-201ENST00000250489 SYNE3Q6ZMZ3 975 aa29.3■■■□□ 2.28
TMEM55B-201ENST00000250489 FSIP1Q8NA03 581 aa29.3■■■□□ 2.28
TMEM55B-201ENST00000250489 RFC4P35249 363 aa29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 DYNLL1P63167 89 aaKnown RBP29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 WTAPQ15007 396 aa29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 MEX3CQ5U5Q3 659 aaKnown RBP29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 KRT40Q6A162 431 aa29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 ADALQ6DHV7 355 aa29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 KCNG4Q8TDN1 519 aa29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 ZKSCAN3Q9BRR0 538 aa29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 MYH13Q9UKX3 1938 aa29.29■■■□□ 2.28
TMEM55B-201ENST00000250489 A0A1W2PQ27 194 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 A0A1W2PQ64 194 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 A0A1W2PQD8 194 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 MINDY4BA8MYZ0 360 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 ZNF500O60304 480 aaPredicted RBP29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 HIBADHP31937 336 aaKnown RBP29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 TRAPPC3LQ5T215 181 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 STK11IPQ8N1F8 1099 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 TFCP2L1Q9NZI6 479 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 BRIP1Q9BX63 1249 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 CBX8Q9HC52 389 aa29.28■■■□□ 2.28
TMEM55B-201ENST00000250489 MRPS27Q92552 414 aaKnown RBP29.27■■■□□ 2.28
TMEM55B-201ENST00000250489 ERICH2A1L162 156 aa29.26■■■□□ 2.28
TMEM55B-201ENST00000250489 ONECUT3O60422 494 aaPredicted RBP29.26■■■□□ 2.28
TMEM55B-201ENST00000250489 KINO60870 393 aaKnown RBP29.26■■■□□ 2.28
TMEM55B-201ENST00000250489 IFNAR1P17181 557 aa29.26■■■□□ 2.28
TMEM55B-201ENST00000250489 TMTC2Q8N394 836 aa29.26■■■□□ 2.28
TMEM55B-201ENST00000250489 NSUN4Q96CB9 384 aaKnown RBP29.26■■■□□ 2.28
TMEM55B-201ENST00000250489 AFF2P51816 1311 aa29.26■■■□□ 2.27
TMEM55B-201ENST00000250489 SPTLC2O15270 562 aa29.26■■■□□ 2.27
TMEM55B-201ENST00000250489 FMNL1O95466 1100 aaPredicted RBP29.26■■■□□ 2.27
TMEM55B-201ENST00000250489 SSRP1Q08945 709 aaKnown RBP29.26■■■□□ 2.27
TMEM55B-201ENST00000250489 SF3A1Q15459 793 aaKnown RBP29.26■■■□□ 2.27
TMEM55B-201ENST00000250489 ANO1Q5XXA6 986 aa29.26■■■□□ 2.27
TMEM55B-201ENST00000250489 FAM196AQ6ZSG2 479 aa29.26■■■□□ 2.27
TMEM55B-201ENST00000250489 LUZP1Q86V48 1076 aa29.26■■■□□ 2.27
TMEM55B-201ENST00000250489 PLCB2Q00722 1185 aa29.25■■■□□ 2.27
TMEM55B-201ENST00000250489 SLC26A6Q9BXS9 759 aa29.25■■■□□ 2.27
TMEM55B-201ENST00000250489 IRS2Q9Y4H2 1338 aa29.25■■■□□ 2.27
TMEM55B-201ENST00000250489 RCAN1P53805 252 aa29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 MECOMQ03112 1051 aa29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 RTN1Q16799 776 aa29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 FMR1NBQ8N0W7 255 aaPredicted RBP29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 ESR2Q92731 530 aa29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 DUOX1Q9NRD9 1551 aa29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 SMIM22K7EJ46 135 aa29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 NPHP1O15259 732 aa29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 NFIXQ14938 502 aa29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.24■■■□□ 2.27
TMEM55B-201ENST00000250489 MAST2Q6P0Q8 1798 aa29.23■■■□□ 2.27
TMEM55B-201ENST00000250489 ZBTB22O15209 634 aa29.23■■■□□ 2.27
TMEM55B-201ENST00000250489 TRIM29Q14134 588 aa29.23■■■□□ 2.27
TMEM55B-201ENST00000250489 UBAC1Q9BSL1 405 aa29.23■■■□□ 2.27
TMEM55B-201ENST00000250489 DNAJC25Q9H1X3 360 aa29.23■■■□□ 2.27
TMEM55B-201ENST00000250489 CAVIN2O95810 425 aa29.22■■■□□ 2.27
TMEM55B-201ENST00000250489 UBE2Q2LH0YL09 131 aa29.22■■■□□ 2.27
TMEM55B-201ENST00000250489 SEC23AQ15436 765 aa29.22■■■□□ 2.27
TMEM55B-201ENST00000250489 SEPT12Q8IYM1 358 aa29.22■■■□□ 2.27
TMEM55B-201ENST00000250489 WASF1Q92558 559 aa29.22■■■□□ 2.27
TMEM55B-201ENST00000250489 BAZ2AQ9UIF9 1905 aaKnown RBP29.22■■■□□ 2.27
TMEM55B-201ENST00000250489 U2AF2P26368 475 aaKnown RBP eCLIP29.21■■■□□ 2.272e-7■■■■□ 24.6
TMEM55B-201ENST00000250489 ZNF165P49910 485 aa29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 CHAF1AQ13111 956 aaPredicted RBP29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 TXNRD3Q86VQ6 643 aa29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 ZNF654Q8IZM8 581 aa29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 TDRD7Q8NHU6 1098 aaKnown RBP29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 LRRC4BQ9NT99 713 aa29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 TNKSO95271 1327 aa29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 CYP2D7A0A087X1C5 515 aa29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 A0A1B0GVL5 298 aa29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 BCL11BQ9C0K0 894 aaPredicted RBP29.21■■■□□ 2.27
TMEM55B-201ENST00000250489 NDUFA8P51970 172 aa29.2■■■□□ 2.26
TMEM55B-201ENST00000250489 GRAPQ13588 217 aa29.2■■■□□ 2.26
TMEM55B-201ENST00000250489 SLC39A14Q15043 492 aa29.2■■■□□ 2.26
TMEM55B-201ENST00000250489 GRAPLQ8TC17 118 aaPredicted RBP29.2■■■□□ 2.26
TMEM55B-201ENST00000250489 CCDC196A0A1B0GTZ2 297 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 FGRP09769 529 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 PRDX5P30044 214 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 GNL2Q13823 731 aaKnown RBP29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 STX1AQ16623 288 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 AXDND1Q5T1B0 1012 aaPredicted RBP29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 CTR9Q6PD62 1173 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 NBPF11Q86T75 865 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 CNBD1Q8NA66 436 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 PCP11498 1178 aaKnown RBP29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 ADRA2BP18089 450 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 TRIM22Q8IYM9 498 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 MPNDQ8N594 471 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 FANCBQ8NB91 859 aa29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 TAOK2Q9UL54 1235 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms