RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 BTBD18B2RXH4 712 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 CDKL5O76039 1030 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 SLC5A1P13866 664 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 ATP2B1P20020 1258 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 GRIN1Q05586 938 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 MAP3K12Q12852 859 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 TMEM87BQ96K49 555 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.54■■■□□ 2.32
RAB40C-201ENST00000248139 ATRNO75882 1429 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 DDX60Q8IY21 1712 aaKnown RBP29.54■■■□□ 2.32
RAB40C-201ENST00000248139 MYH3P11055 1940 aa29.54■■■□□ 2.32
RAB40C-201ENST00000248139 TDO2P48775 406 aa29.53■■■□□ 2.32
RAB40C-201ENST00000248139 PTPN14Q15678 1187 aa29.53■■■□□ 2.32
RAB40C-201ENST00000248139 LONRF3Q496Y0 759 aa29.53■■■□□ 2.32
RAB40C-201ENST00000248139 ARMCX5Q6P1M9 558 aa29.53■■■□□ 2.32
RAB40C-201ENST00000248139 TRIM29Q14134 588 aa29.53■■■□□ 2.32
RAB40C-201ENST00000248139 ANKRD7Q92527 254 aa29.53■■■□□ 2.32
RAB40C-201ENST00000248139 SLC4A4Q9Y6R1 1079 aa29.53■■■□□ 2.32
RAB40C-201ENST00000248139 MROH5Q6ZUA9 1318 aa29.52■■■□□ 2.32
RAB40C-201ENST00000248139 IL6STP40189 918 aaPredicted RBP29.52■■■□□ 2.32
RAB40C-201ENST00000248139 DPF2Q92785 391 aa29.52■■■□□ 2.32
RAB40C-201ENST00000248139 LRP6O75581 1613 aa29.52■■■□□ 2.32
RAB40C-201ENST00000248139 FOXP4Q8IVH2 680 aaPredicted RBP29.52■■■□□ 2.32
RAB40C-201ENST00000248139 CCAR2Q8N163 923 aaKnown RBP29.51■■■□□ 2.32
RAB40C-201ENST00000248139 HSD3B7Q9H2F3 369 aa29.51■■■□□ 2.32
RAB40C-201ENST00000248139 SSRP1Q08945 709 aaKnown RBP29.51■■■□□ 2.31
RAB40C-201ENST00000248139 GOLGA8FQ08AF8 430 aa29.51■■■□□ 2.31
RAB40C-201ENST00000248139 GOLGA8DPQ0D2H9 430 aa29.51■■■□□ 2.31
RAB40C-201ENST00000248139 AKNAD1Q5T1N1 836 aa29.51■■■□□ 2.31
RAB40C-201ENST00000248139 MFSD6Q6ZSS7 791 aa29.51■■■□□ 2.31
RAB40C-201ENST00000248139 NUP133Q8WUM0 1156 aa29.5■■■□□ 2.31
RAB40C-201ENST00000248139 SDR42E1Q8WUS8 393 aa29.5■■■□□ 2.31
RAB40C-201ENST00000248139 HPSEQ9Y251 543 aa29.5■■■□□ 2.31
RAB40C-201ENST00000248139 ERVV-1B6SEH8 477 aa29.5■■■□□ 2.31
RAB40C-201ENST00000248139 SGMS1Q86VZ5 419 aa29.5■■■□□ 2.31
RAB40C-201ENST00000248139 NEMFO60524 1076 aa29.49■■■□□ 2.31
RAB40C-201ENST00000248139 ADGRA1Q86SQ6 560 aa29.49■■■□□ 2.31
RAB40C-201ENST00000248139 FANCCQ00597 558 aa29.49■■■□□ 2.31
RAB40C-201ENST00000248139 NR5A1Q13285 461 aa29.49■■■□□ 2.31
RAB40C-201ENST00000248139 INTS5Q6P9B9 1019 aaKnown RBP29.49■■■□□ 2.31
RAB40C-201ENST00000248139 NYAP1Q6ZVC0 841 aa29.49■■■□□ 2.31
RAB40C-201ENST00000248139 METTL16Q86W50 562 aaKnown RBP29.49■■■□□ 2.31
RAB40C-201ENST00000248139 LRP2BPQ9P2M1 347 aa29.49■■■□□ 2.31
RAB40C-201ENST00000248139 ABCF2Q9UG63 623 aa29.49■■■□□ 2.31
RAB40C-201ENST00000248139 hCG_1642624A0A1W2PR95 340 aa29.48■■■□□ 2.31
RAB40C-201ENST00000248139 MINDY4BA8MYZ0 360 aa29.48■■■□□ 2.31
RAB40C-201ENST00000248139 PAXBP1Q9Y5B6 917 aa29.48■■■□□ 2.31
RAB40C-201ENST00000248139 TOB1P50616 345 aaPredicted RBP29.48■■■□□ 2.31
RAB40C-201ENST00000248139 E4F1Q66K89 784 aaPredicted RBP29.48■■■□□ 2.31
RAB40C-201ENST00000248139 BPIFA3Q9BQP9 254 aa29.48■■■□□ 2.31
RAB40C-201ENST00000248139 ATP6V1AP38606 617 aa29.47■■■□□ 2.31
RAB40C-201ENST00000248139 EIF5P55010 431 aaKnown RBP29.47■■■□□ 2.31
RAB40C-201ENST00000248139 DIS3L2Q8IYB7 885 aaKnown RBP29.47■■■□□ 2.31
RAB40C-201ENST00000248139 OSBPL5Q9H0X9 879 aaPredicted RBP29.47■■■□□ 2.31
RAB40C-201ENST00000248139 PPP6R2O75170 966 aa29.47■■■□□ 2.31
RAB40C-201ENST00000248139 CRKLP46109 303 aaKnown RBP29.47■■■□□ 2.31
RAB40C-201ENST00000248139 ALX1Q15699 326 aa29.47■■■□□ 2.31
RAB40C-201ENST00000248139 RESP18Q5W5W9 173 aa29.47■■■□□ 2.31
RAB40C-201ENST00000248139 UTP14AQ9BVJ6 771 aaKnown RBP29.47■■■□□ 2.31
RAB40C-201ENST00000248139 LIFRP42702 1097 aa29.46■■■□□ 2.31
RAB40C-201ENST00000248139 CNNM3Q8NE01 707 aa29.46■■■□□ 2.31
RAB40C-201ENST00000248139 ZNF215Q9UL58 517 aaPredicted RBP29.46■■■□□ 2.31
RAB40C-201ENST00000248139 KCNH3Q9ULD8 1083 aa29.46■■■□□ 2.31
RAB40C-201ENST00000248139 PCDHA5Q9Y5H7 936 aa29.46■■■□□ 2.31
RAB40C-201ENST00000248139 SMIM5Q71RC9 77 aa29.46■■■□□ 2.31
RAB40C-201ENST00000248139 GRAMD1CQ8IYS0 662 aa29.46■■■□□ 2.31
RAB40C-201ENST00000248139 OXER1Q8TDS5 423 aa29.46■■■□□ 2.31
RAB40C-201ENST00000248139 NIP7Q9Y221 180 aaKnown RBP eCLIP29.46■■■□□ 2.31
RAB40C-201ENST00000248139 NPHP1O15259 732 aa29.45■■■□□ 2.31
RAB40C-201ENST00000248139 FMNL1O95466 1100 aaPredicted RBP29.45■■■□□ 2.31
RAB40C-201ENST00000248139 PDE4BQ07343 736 aa29.45■■■□□ 2.31
RAB40C-201ENST00000248139 TUBE1Q9UJT0 475 aa29.45■■■□□ 2.31
RAB40C-201ENST00000248139 BMP6P22004 513 aa29.45■■■□□ 2.3
RAB40C-201ENST00000248139 WTAPQ15007 396 aa29.45■■■□□ 2.3
RAB40C-201ENST00000248139 NOSTRINQ8IVI9 506 aa29.45■■■□□ 2.3
RAB40C-201ENST00000248139 PDILTQ8N807 584 aa29.45■■■□□ 2.3
RAB40C-201ENST00000248139 JMYQ8N9B5 988 aa29.45■■■□□ 2.3
RAB40C-201ENST00000248139 CYP2D7A0A087X1C5 515 aa29.44■■■□□ 2.3
RAB40C-201ENST00000248139 TMEM232C9JQI7 657 aa29.44■■■□□ 2.3
RAB40C-201ENST00000248139 GSDMDP57764 484 aa29.44■■■□□ 2.3
RAB40C-201ENST00000248139 RTN1Q16799 776 aa29.44■■■□□ 2.3
RAB40C-201ENST00000248139 ANKRD36CQ5JPF3 1778 aa29.44■■■□□ 2.3
RAB40C-201ENST00000248139 SFPQP23246 707 aaKnown RBP eCLIP29.44■■■□□ 2.3
RAB40C-201ENST00000248139 GYG1P46976 350 aa29.44■■■□□ 2.3
RAB40C-201ENST00000248139 CHRNDQ07001 517 aa29.44■■■□□ 2.3
RAB40C-201ENST00000248139 ZNF827Q17R98 1081 aa29.44■■■□□ 2.3
RAB40C-201ENST00000248139 ECM29Q5VYK3 1845 aa29.43■■■□□ 2.3
RAB40C-201ENST00000248139 SERPINC1P01008 464 aa29.43■■■□□ 2.3
RAB40C-201ENST00000248139 FANCLQ9NW38 375 aa29.43■■■□□ 2.3
RAB40C-201ENST00000248139 PCDHB6Q9Y5E3 794 aa29.43■■■□□ 2.3
RAB40C-201ENST00000248139 DISP2A7MBM2 1401 aa29.43■■■□□ 2.3
RAB40C-201ENST00000248139 CYP7A1P22680 504 aa29.43■■■□□ 2.3
RAB40C-201ENST00000248139 IFNAR1P17181 557 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 TPM4P67936 248 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 ITPK1Q13572 414 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 KRBA2Q6ZNG9 492 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 USP49Q70CQ1 688 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 CCDC87Q9NVE4 849 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 FAM205CA6NFA0 338 aa29.42■■■□□ 2.3
RAB40C-201ENST00000248139 MMP1P03956 469 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms