RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CERS5Q8N5B7 392 aa27.45■■□□□ 1.99
SYNGR3-201ENST00000248121 RTFDC1Q9BY42 306 aaPredicted RBP27.45■■□□□ 1.99
SYNGR3-201ENST00000248121 FAM205AQ6ZU69 1335 aa27.45■■□□□ 1.99
SYNGR3-201ENST00000248121 POLD1P28340 1107 aa27.45■■□□□ 1.98
SYNGR3-201ENST00000248121 L1TD1Q5T7N2 865 aaKnown RBP27.45■■□□□ 1.98
SYNGR3-201ENST00000248121 SPTY2D1Q68D10 685 aaPredicted RBP27.45■■□□□ 1.98
SYNGR3-201ENST00000248121 TMEM63CQ9P1W3 806 aa27.45■■□□□ 1.98
SYNGR3-201ENST00000248121 NAP1L2Q9ULW6 460 aaPredicted RBP27.45■■□□□ 1.98
SYNGR3-201ENST00000248121 HPS5Q9UPZ3 1129 aa27.45■■□□□ 1.98
SYNGR3-201ENST00000248121 CTDSPL2Q05D32 466 aa27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 TRDNQ13061 729 aa27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 AOC3Q16853 763 aa27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 PPP1R1BQ9UD71 204 aaPredicted RBP27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 PTPDC1A2A3K4 754 aa27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 B4E1Z4 1266 aa27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 MBD3O95983 291 aa27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 ZSCAN23Q3MJ62 389 aa27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 EYA3Q99504 573 aa27.44■■□□□ 1.98
SYNGR3-201ENST00000248121 XRCC6P12956 609 aaKnown RBP eCLIP27.43■■□□□ 1.98
SYNGR3-201ENST00000248121 EVX2Q03828 476 aa27.43■■□□□ 1.98
SYNGR3-201ENST00000248121 KLF18A0A0U1RQI7 1052 aa27.42■■□□□ 1.98
SYNGR3-201ENST00000248121 PTGER2P43116 358 aa27.42■■□□□ 1.98
SYNGR3-201ENST00000248121 TDO2P48775 406 aa27.42■■□□□ 1.98
SYNGR3-201ENST00000248121 KLHL34Q8N239 644 aa27.42■■□□□ 1.98
SYNGR3-201ENST00000248121 COL4A5P29400 1685 aa27.42■■□□□ 1.98
SYNGR3-201ENST00000248121 LAMB1P07942 1786 aa27.42■■□□□ 1.98
SYNGR3-201ENST00000248121 FAM173BQ6P4H8 233 aa27.42■■□□□ 1.98
SYNGR3-201ENST00000248121 ISY1Q9ULR0 285 aaKnown RBP27.42■■□□□ 1.98
SYNGR3-201ENST00000248121 FIBPO43427 364 aa27.41■■□□□ 1.98
SYNGR3-201ENST00000248121 STK11IPQ8N1F8 1099 aa27.41■■□□□ 1.98
SYNGR3-201ENST00000248121 NACAP1Q9BZK3 213 aa27.41■■□□□ 1.98
SYNGR3-201ENST00000248121 CYP2D7A0A087X1C5 515 aa27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 ZNF445P59923 1031 aa27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 F8W031 263 aaPredicted RBP27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 SH2B2O14492 632 aaPredicted RBP27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 ECE2O60344 883 aa27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 PPFIA3O75145 1194 aa27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 HMGN5P82970 282 aaKnown RBP27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 AKNAD1Q5T1N1 836 aa27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 SENP2Q9HC62 589 aa27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 ANGEL1Q9UNK9 670 aaKnown RBP27.4■■□□□ 1.98
SYNGR3-201ENST00000248121 MROH7-TTC4A0A0A0MT08 1334 aa27.39■■□□□ 1.98
SYNGR3-201ENST00000248121 FAM184AQ8NB25 1140 aa27.39■■□□□ 1.98
SYNGR3-201ENST00000248121 UTRNP46939 3433 aa27.39■■□□□ 1.98
SYNGR3-201ENST00000248121 NAV1Q8NEY1 1877 aa27.39■■□□□ 1.98
SYNGR3-201ENST00000248121 GOLGA8BA8MQT2 603 aa27.39■■□□□ 1.97
SYNGR3-201ENST00000248121 G3V3G9 751 aa27.39■■□□□ 1.97
SYNGR3-201ENST00000248121 FDPSP14324 419 aaKnown RBP27.39■■□□□ 1.97
SYNGR3-201ENST00000248121 DCAF8Q5TAQ9 597 aa27.39■■□□□ 1.97
SYNGR3-201ENST00000248121 RAB11FIP4Q86YS3 637 aa27.39■■□□□ 1.97
SYNGR3-201ENST00000248121 IGDCC4Q8TDY8 1250 aa27.39■■□□□ 1.97
SYNGR3-201ENST00000248121 SH3RF3Q8TEJ3 882 aaPredicted RBP27.39■■□□□ 1.97
SYNGR3-201ENST00000248121 TBC1D22AQ8WUA7 517 aa27.38■■□□□ 1.97
SYNGR3-201ENST00000248121 STAG1Q8WVM7 1258 aa27.38■■□□□ 1.97
SYNGR3-201ENST00000248121 GRPEL1Q9HAV7 217 aa27.38■■□□□ 1.97
SYNGR3-201ENST00000248121 MRE11P49959 708 aa27.37■■□□□ 1.97
SYNGR3-201ENST00000248121 TGFB2P61812 414 aa27.37■■□□□ 1.97
SYNGR3-201ENST00000248121 CCDC93Q567U6 631 aa27.37■■□□□ 1.97
SYNGR3-201ENST00000248121 ZSWIM5Q9P217 1185 aa27.37■■□□□ 1.97
SYNGR3-201ENST00000248121 KIAA2012Q0VF49 1180 aa27.37■■□□□ 1.97
SYNGR3-201ENST00000248121 RESTQ13127 1097 aa27.37■■□□□ 1.97
SYNGR3-201ENST00000248121 PSME4Q14997 1843 aa27.36■■□□□ 1.97
SYNGR3-201ENST00000248121 CC2D2BQ6DHV5 1058 aa27.36■■□□□ 1.97
SYNGR3-201ENST00000248121 DCP1AQ9NPI6 582 aaPredicted RBP27.36■■□□□ 1.97
SYNGR3-201ENST00000248121 PPIP5K2O43314 1243 aa27.36■■□□□ 1.97
SYNGR3-201ENST00000248121 KDM4AO75164 1064 aa27.36■■□□□ 1.97
SYNGR3-201ENST00000248121 MFSD6Q6ZSS7 791 aa27.36■■□□□ 1.97
SYNGR3-201ENST00000248121 TMEM87BQ96K49 555 aa27.36■■□□□ 1.97
SYNGR3-201ENST00000248121 FER1L6Q2WGJ9 1857 aa27.36■■□□□ 1.97
SYNGR3-201ENST00000248121 YDJCA8MPS7 323 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 MINDY4BA8MYZ0 360 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 BTDP43251 543 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 PPARAQ07869 468 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 SLC4A8Q2Y0W8 1093 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 PODNQ7Z5L7 613 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 PANK2Q9BZ23 570 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 CNNM2Q9H8M5 875 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 LY9Q9HBG7 655 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 ZNF277Q9NRM2 450 aaPredicted RBP27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 PIM2Q9P1W9 311 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 DDX60LQ5H9U9 1706 aaKnown RBP27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 FOCADQ5VW36 1801 aa27.35■■□□□ 1.97
SYNGR3-201ENST00000248121 H3BQV1 296 aa27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 UBE2HP62256 183 aa27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 GSTO1P78417 241 aa27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 IFFO2Q5TF58 517 aa27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 CHMP4CQ96CF2 233 aa27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 CRNKL1Q9BZJ0 848 aaKnown RBP27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 CYP2D6P10635 497 aa27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 CTR9Q6PD62 1173 aa27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 TTC6Q86TZ1 520 aa27.34■■□□□ 1.97
SYNGR3-201ENST00000248121 SCNN1DP51172 638 aa27.33■■□□□ 1.97
SYNGR3-201ENST00000248121 FOSBP53539 338 aa27.33■■□□□ 1.97
SYNGR3-201ENST00000248121 KRT85P78386 507 aa27.33■■□□□ 1.97
SYNGR3-201ENST00000248121 KRT23Q9C075 422 aa27.33■■□□□ 1.97
SYNGR3-201ENST00000248121 ANAPC4Q9UJX5 808 aa27.33■■□□□ 1.97
SYNGR3-201ENST00000248121 GAKO14976 1311 aa27.33■■□□□ 1.97
SYNGR3-201ENST00000248121 APOA5Q6Q788 366 aa27.32■■□□□ 1.96
SYNGR3-201ENST00000248121 SGMS1Q86VZ5 419 aa27.32■■□□□ 1.96
SYNGR3-201ENST00000248121 TTF2Q9UNY4 1162 aaKnown RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms