RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 BRD1O95696 1058 aa12.8□□□□□ -0.36
FAM78A-201ENST00000247295 INPP5BP32019 993 aa12.8□□□□□ -0.36
FAM78A-201ENST00000247295 CYLC1P35663 651 aaPredicted RBP12.8□□□□□ -0.36
FAM78A-201ENST00000247295 SP4Q02446 784 aa12.8□□□□□ -0.36
FAM78A-201ENST00000247295 CCDC121Q6ZUS5 278 aa12.8□□□□□ -0.36
FAM78A-201ENST00000247295 LPIN2Q92539 896 aa12.8□□□□□ -0.36
FAM78A-201ENST00000247295 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
FAM78A-201ENST00000247295 CTAGE9A4FU28 777 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 TCIRG1Q13488 830 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 CEP112Q8N8E3 955 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 BICD1Q96G01 975 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 DENND2AQ9ULE3 1009 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 ZBTB21Q9ULJ3 1066 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 SPDYE3A6NKU9 549 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 CLGNO14967 610 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 CLNS1AP54105 237 aaKnown RBP12.79□□□□□ -0.36
FAM78A-201ENST00000247295 PLS1Q14651 629 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 KRT40Q6A162 431 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 TLR7Q9NYK1 1049 aaKnown RBP12.79□□□□□ -0.36
FAM78A-201ENST00000247295 GCC2Q8IWJ2 1684 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 PRR36Q9H6K5 1346 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 WDHD1O75717 1129 aaPredicted RBP12.79□□□□□ -0.36
FAM78A-201ENST00000247295 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 PARP10Q53GL7 1025 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 ANKRD2Q9GZV1 360 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 VPS16Q9H269 839 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 LMTK3Q96Q04 1460 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 RILPL1Q5EBL4 403 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 CCDC87Q9NVE4 849 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 PKD2L1Q9P0L9 805 aa12.79□□□□□ -0.36
FAM78A-201ENST00000247295 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 NDUFAB1O14561 156 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 GNA11P29992 359 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 AKNAD1Q5T1N1 836 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 SPATA5Q8NB90 893 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 FAM76AQ8TAV0 307 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 CCDC42Q96M95 316 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 GDAP1L1Q96MZ0 367 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 ELP1O95163 1332 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 NEBLO76041 1014 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 ADD1P35611 737 aaKnown RBP12.78□□□□□ -0.36
FAM78A-201ENST00000247295 CCDC174Q6PII3 467 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 STXBP4Q6ZWJ1 553 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 PLCG2P16885 1265 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 FCHSD1Q86WN1 690 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 PUS3Q9BZE2 481 aaKnown RBP12.78□□□□□ -0.36
FAM78A-201ENST00000247295 ZNF202O95125 648 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 DEXIO95424 95 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 CTNNA2P26232 953 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 LRRC27Q9C0I9 530 aa12.78□□□□□ -0.36
FAM78A-201ENST00000247295 INSRP06213 1382 aa12.77□□□□□ -0.36
FAM78A-201ENST00000247295 FAM47AQ5JRC9 791 aa12.77□□□□□ -0.36
FAM78A-201ENST00000247295 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.36
FAM78A-201ENST00000247295 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.36
FAM78A-201ENST00000247295 LIG3P49916 1009 aa12.77□□□□□ -0.37
FAM78A-201ENST00000247295 SF3A3Q12874 501 aaKnown RBP eCLIP12.77□□□□□ -0.37
FAM78A-201ENST00000247295 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
FAM78A-201ENST00000247295 VPS54Q9P1Q0 977 aa12.77□□□□□ -0.37
FAM78A-201ENST00000247295 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
FAM78A-201ENST00000247295 HNRNPH2P55795 449 aaKnown RBP12.77□□□□□ -0.37
FAM78A-201ENST00000247295 ZYXQ15942 572 aaKnown RBP12.77□□□□□ -0.37
FAM78A-201ENST00000247295 MAPKAPK5Q8IW41 473 aa12.77□□□□□ -0.37
FAM78A-201ENST00000247295 LLPHQ9BRT6 129 aaKnown RBP12.77□□□□□ -0.37
FAM78A-201ENST00000247295 CLSTN2Q9H4D0 955 aa12.77□□□□□ -0.37
FAM78A-201ENST00000247295 KIF4AO95239 1232 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 DESP17661 470 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 GYG1P46976 350 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 KIF5AQ12840 1032 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 TCHPQ9BT92 498 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
FAM78A-201ENST00000247295 ASAP1Q9ULH1 1129 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 LUC7L2Q9Y383 392 aaKnown RBP12.76□□□□□ -0.37
FAM78A-201ENST00000247295 TUBB4AP04350 444 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 SPECC1LQ69YQ0 1117 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 TXKP42681 527 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 TRMT44Q8IYL2 757 aaKnown RBP12.76□□□□□ -0.37
FAM78A-201ENST00000247295 SDR42E1Q8WUS8 393 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 DBNLQ9UJU6 430 aaKnown RBP12.76□□□□□ -0.37
FAM78A-201ENST00000247295 ROBO2Q9HCK4 1378 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 IBTKQ9P2D0 1353 aaPredicted RBP12.76□□□□□ -0.37
FAM78A-201ENST00000247295 KDM5AP29375 1690 aaKnown RBP12.76□□□□□ -0.37
FAM78A-201ENST00000247295 ANKRD65E5RJM6 399 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 NRBP1Q9UHY1 535 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
FAM78A-201ENST00000247295 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
FAM78A-201ENST00000247295 USP17L21D6R901 530 aa12.75□□□□□ -0.37
FAM78A-201ENST00000247295 OPA1O60313 960 aa12.75□□□□□ -0.37
FAM78A-201ENST00000247295 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
FAM78A-201ENST00000247295 RSRC1Q96IZ7 334 aaKnown RBP12.75□□□□□ -0.37
FAM78A-201ENST00000247295 USP28Q96RU2 1077 aa12.75□□□□□ -0.37
FAM78A-201ENST00000247295 TM6SF1Q9BZW5 370 aa12.75□□□□□ -0.37
FAM78A-201ENST00000247295 HDAC9Q9UKV0 1011 aa12.75□□□□□ -0.37
FAM78A-201ENST00000247295 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms