RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TAF6LQ9Y6J9 622 aa20.02■□□□□ 0.8
CDKN1A-201ENST00000244741 MYO3BQ8WXR4 1341 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 GSG1L2A8MUP6 293 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 BAG3O95817 575 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 EGFRP00533 1210 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 ADCK5Q3MIX3 580 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 APOBEC3HQ6NTF7 200 aaKnown RBP20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 AGBL3Q8NEM8 1001 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 KCNB2Q92953 911 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 EPB41L4AQ9HCS5 686 aaPredicted RBP20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 FGAP02671 866 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 HAND2P61296 217 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 STK11IPQ8N1F8 1099 aa20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 FAM163AQ96GL9 167 aaPredicted RBP20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 PRMT6Q96LA8 375 aaPredicted RBP20.01■□□□□ 0.79
CDKN1A-201ENST00000244741 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
CDKN1A-201ENST00000244741 NECTIN1Q15223 517 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
CDKN1A-201ENST00000244741 HHIPL2Q6UWX4 724 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
CDKN1A-201ENST00000244741 MICALL2Q8IY33 904 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 TGFBRAP1Q8WUH2 860 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 JAKMIP1Q96N16 626 aaKnown RBP20■□□□□ 0.79
CDKN1A-201ENST00000244741 RPAP1Q9BWH6 1393 aaPredicted RBP20■□□□□ 0.79
CDKN1A-201ENST00000244741 PATL2C9JE40 543 aaKnown RBP20■□□□□ 0.79
CDKN1A-201ENST00000244741 SMIM22K7EJ46 135 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 RHBDL3P58872 404 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 IFNL3Q8IZI9 196 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 USP40Q9NVE5 1235 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 SERPINA10Q9UK55 444 aa20■□□□□ 0.79
CDKN1A-201ENST00000244741 EVX2Q03828 476 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 PICALMQ13492 652 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 CDC42EP5Q6NZY7 148 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 SAMD7Q7Z3H4 446 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 MAPKAPK5Q8IW41 473 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 TEX11Q8IYF3 940 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 ZDHHC15Q96MV8 337 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 DSCC1Q9BVC3 393 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 CRNKL1Q9BZJ0 848 aaKnown RBP19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 RBSNQ9H1K0 784 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 TDRD3Q9H7E2 651 aaKnown RBP19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 CNOT7Q9UIV1 285 aaKnown RBP19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 HDAC9Q9UKV0 1011 aa19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 SCAF8Q9UPN6 1271 aaKnown RBP19.99■□□□□ 0.79
CDKN1A-201ENST00000244741 LARGE1O95461 756 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 USP5P45974 858 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 TDO2P48775 406 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 TM6SF1Q9BZW5 370 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 ZSWIM6Q9HCJ5 1215 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 TIAM2Q8IVF5 1701 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 CYP2D7A0A087X1C5 515 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 MBD3O95983 291 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 PPP4CP60510 307 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 TBC1D10BQ4KMP7 808 aaPredicted RBP19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 CREB3L3Q68CJ9 461 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 GPC2Q8N158 579 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 PPP1R9BQ96SB3 815 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 PDRG1Q9NUG6 133 aa19.98■□□□□ 0.79
CDKN1A-201ENST00000244741 CLRN2A0PK11 232 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 CCDC173Q0VFZ6 552 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 DLGAP5Q15398 846 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 NAPBQ9H115 298 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 MYOZ2Q9NPC6 264 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 SAP30BPQ9UHR5 308 aaKnown RBP19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 SLC27A2O14975 620 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 GNAT2P19087 354 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 NFIAQ12857 509 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 NBPF9Q3BBW0 867 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 TRIM44Q96DX7 344 aaPredicted RBP19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 GDPD2Q9HCC8 539 aa19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 U3KPZ7 1027 aaPredicted RBP19.97■□□□□ 0.79
CDKN1A-201ENST00000244741 BAZ2AQ9UIF9 1905 aaKnown RBP19.96■□□□□ 0.79
CDKN1A-201ENST00000244741 CYP21A2P08686 494 aa19.96■□□□□ 0.79
CDKN1A-201ENST00000244741 CLCN1P35523 988 aa19.96■□□□□ 0.79
CDKN1A-201ENST00000244741 EPS15P42566 896 aa19.96■□□□□ 0.79
CDKN1A-201ENST00000244741 HDLBPQ00341 1268 aaKnown RBP19.96■□□□□ 0.79
CDKN1A-201ENST00000244741 DCP1AQ9NPI6 582 aaPredicted RBP19.96■□□□□ 0.79
CDKN1A-201ENST00000244741 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.96■□□□□ 0.79
CDKN1A-201ENST00000244741 CYP46A1Q9Y6A2 500 aa19.96■□□□□ 0.79
CDKN1A-201ENST00000244741 SYCE3A1L190 88 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 SPDYE2BA6NHP3 402 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 MINDY4BA8MYZ0 360 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 ESPNB1AK53 854 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 SPDYE6P0CI01 402 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 RPS12P25398 132 aaKnown RBP19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 TCP10Q12799 353 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 COL9A3Q14050 684 aaPredicted RBP19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 MRIQ9BWK5 157 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 DDX4Q9NQI0 724 aaKnown RBP19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 INCENPQ9NQS7 918 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 GADD45BO75293 160 aaPredicted RBP19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 CYP2D6P10635 497 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 SYT1P21579 422 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 TMED8Q6PL24 325 aaPredicted RBP19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 LRSAM1Q6UWE0 723 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 USP48Q86UV5 1035 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 NACAP1Q9BZK3 213 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 MCM9Q9NXL9 1143 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 SMC3Q9UQE7 1217 aa19.95■□□□□ 0.78
CDKN1A-201ENST00000244741 ASTN2O75129 1339 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms