RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 MAP4K1Q92918 833 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 DSCC1Q9BVC3 393 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 IDI2Q9BXS1 227 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 USP26Q9BXU7 913 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 SAP30BPQ9UHR5 308 aaKnown RBP24.1■■□□□ 1.45
SNRPA-201ENST00000243563 TAF6LQ9Y6J9 622 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 FGAP02671 866 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 GNAT2P19087 354 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 GGA3Q9NZ52 723 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 RBM8AQ9Y5S9 174 aaKnown RBP24.1■■□□□ 1.45
SNRPA-201ENST00000243563 IQCA1LA6NCM1 817 aa24.09■■□□□ 1.45
SNRPA-201ENST00000243563 SH3BP5LQ7L8J4 393 aa24.09■■□□□ 1.45
SNRPA-201ENST00000243563 SLURP2P0DP57 97 aa24.08■■□□□ 1.45
SNRPA-201ENST00000243563 DLK2Q6UY11 383 aa24.08■■□□□ 1.45
SNRPA-201ENST00000243563 KIAA1211Q6ZU35 1233 aa24.08■■□□□ 1.45
SNRPA-201ENST00000243563 CERS3Q8IU89 383 aa24.08■■□□□ 1.45
SNRPA-201ENST00000243563 ATP8A2Q9NTI2 1148 aa24.08■■□□□ 1.45
SNRPA-201ENST00000243563 RPAP1Q9BWH6 1393 aaPredicted RBP24.07■■□□□ 1.44
SNRPA-201ENST00000243563 MYO1BO43795 1136 aa24.07■■□□□ 1.44
SNRPA-201ENST00000243563 REC8O95072 547 aa24.07■■□□□ 1.44
SNRPA-201ENST00000243563 EAPPQ56P03 285 aaPredicted RBP24.07■■□□□ 1.44
SNRPA-201ENST00000243563 USP50Q70EL3 339 aaPredicted RBP24.07■■□□□ 1.44
SNRPA-201ENST00000243563 NBPF3Q9H094 633 aa24.07■■□□□ 1.44
SNRPA-201ENST00000243563 OSBPL5Q9H0X9 879 aaPredicted RBP24.07■■□□□ 1.44
SNRPA-201ENST00000243563 PALD1Q9ULE6 856 aa24.07■■□□□ 1.44
SNRPA-201ENST00000243563 TACC3Q9Y6A5 838 aa24.07■■□□□ 1.44
SNRPA-201ENST00000243563 TDO2P48775 406 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 ALX1Q15699 326 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 CTR9Q6PD62 1173 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 DDTLA6NHG4 134 aaPredicted RBP24.06■■□□□ 1.44
SNRPA-201ENST00000243563 USP17L12C9JPN9 530 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 USP17L21D6R901 530 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 VEGFAP15692 232 aaPredicted RBP24.06■■□□□ 1.44
SNRPA-201ENST00000243563 HAND2P61296 217 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 TMEM39BQ9GZU3 492 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 NAPBQ9H115 298 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 MCM9Q9NXL9 1143 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 PGAP2Q9UHJ9 254 aa24.06■■□□□ 1.44
SNRPA-201ENST00000243563 NECTIN1Q15223 517 aa24.05■■□□□ 1.44
SNRPA-201ENST00000243563 TMOD2Q9NZR1 351 aa24.05■■□□□ 1.44
SNRPA-201ENST00000243563 ZMYM6O95789 1325 aa24.05■■□□□ 1.44
SNRPA-201ENST00000243563 PLCD1P51178 756 aa24.04■■□□□ 1.44
SNRPA-201ENST00000243563 GIMAP6Q6P9H5 292 aa24.04■■□□□ 1.44
SNRPA-201ENST00000243563 U3KPZ7 1027 aaPredicted RBP24.04■■□□□ 1.44
SNRPA-201ENST00000243563 ENTPD3O75355 529 aa24.03■■□□□ 1.44
SNRPA-201ENST00000243563 NPM3O75607 178 aaKnown RBP24.03■■□□□ 1.44
SNRPA-201ENST00000243563 CYP21A2P08686 494 aa24.03■■□□□ 1.44
SNRPA-201ENST00000243563 RASA3Q14644 834 aa24.03■■□□□ 1.44
SNRPA-201ENST00000243563 FKBP1CQ5VVH2 108 aa24.03■■□□□ 1.44
SNRPA-201ENST00000243563 MYH8P13535 1937 aa24.03■■□□□ 1.44
SNRPA-201ENST00000243563 ADM5C9JUS6 153 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 SLC27A2O14975 620 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 CTDSPL2Q05D32 466 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 COL9A3Q14050 684 aaPredicted RBP24.02■■□□□ 1.44
SNRPA-201ENST00000243563 PRAMEF18Q5VWM3 479 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 RASEFQ8IZ41 740 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 STK11IPQ8N1F8 1099 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 NKX2-3Q8TAU0 364 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 FAM151AQ8WW52 585 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 TEPSINQ96N21 525 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 NACAP1Q9BZK3 213 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 INCENPQ9NQS7 918 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 COL2A1P02458 1487 aaPredicted RBP24.02■■□□□ 1.44
SNRPA-201ENST00000243563 MINDY4BA8MYZ0 360 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 C12orf60Q5U649 245 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 CREB3L3Q68CJ9 461 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 TBC1D10CQ8IV04 446 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 ATRNL1Q5VV63 1379 aa24.02■■□□□ 1.44
SNRPA-201ENST00000243563 HSPA4P34932 840 aa24.01■■□□□ 1.43
SNRPA-201ENST00000243563 SBK1Q52WX2 424 aa24.01■■□□□ 1.43
SNRPA-201ENST00000243563 FAM83AQ86UY5 434 aa24.01■■□□□ 1.43
SNRPA-201ENST00000243563 DYNLL2Q96FJ2 89 aa24.01■■□□□ 1.43
SNRPA-201ENST00000243563 PITPNM2Q9BZ72 1349 aa24.01■■□□□ 1.43
SNRPA-201ENST00000243563 DEFB129Q9H1M3 183 aa24.01■■□□□ 1.43
SNRPA-201ENST00000243563 SSC5DA1L4H1 1573 aa24■■□□□ 1.43
SNRPA-201ENST00000243563 PPARAQ07869 468 aa24■■□□□ 1.43
SNRPA-201ENST00000243563 STOX1Q6ZVD7 989 aa24■■□□□ 1.43
SNRPA-201ENST00000243563 PNMA8AQ86V59 439 aaPredicted RBP24■■□□□ 1.43
SNRPA-201ENST00000243563 APOBEC3FQ8IUX4 373 aaKnown RBP24■■□□□ 1.43
SNRPA-201ENST00000243563 ARPP21Q9UBL0 812 aaPredicted RBP24■■□□□ 1.43
SNRPA-201ENST00000243563 FAM196BA6NMK8 535 aa23.99■■□□□ 1.43
SNRPA-201ENST00000243563 POLR3DP05423 398 aaPredicted RBP23.99■■□□□ 1.43
SNRPA-201ENST00000243563 MAP1SQ66K74 1059 aaPredicted RBP23.99■■□□□ 1.43
SNRPA-201ENST00000243563 SLC44A5Q8NCS7 719 aa23.99■■□□□ 1.43
SNRPA-201ENST00000243563 ZC3H15Q8WU90 426 aaKnown RBP23.99■■□□□ 1.43
SNRPA-201ENST00000243563 KCNB2Q92953 911 aa23.99■■□□□ 1.43
SNRPA-201ENST00000243563 GLIS2Q9BZE0 524 aaPredicted RBP23.99■■□□□ 1.43
SNRPA-201ENST00000243563 DNAJC18Q9H819 358 aa23.99■■□□□ 1.43
SNRPA-201ENST00000243563 ROBO3Q96MS0 1386 aa23.98■■□□□ 1.43
SNRPA-201ENST00000243563 FMR1Q06787 632 aaKnown RBP eCLIP23.98■■□□□ 1.43
SNRPA-201ENST00000243563 ZSCAN29Q8IWY8 852 aaPredicted RBP23.98■■□□□ 1.43
SNRPA-201ENST00000243563 DCPSQ96C86 337 aaKnown RBP23.98■■□□□ 1.43
SNRPA-201ENST00000243563 DDRGK1Q96HY6 314 aa23.98■■□□□ 1.43
SNRPA-201ENST00000243563 CTNNA3Q9UI47 895 aa23.98■■□□□ 1.43
SNRPA-201ENST00000243563 CLEC11AQ9Y240 323 aa23.98■■□□□ 1.43
SNRPA-201ENST00000243563 SNX14Q9Y5W7 946 aa23.98■■□□□ 1.43
SNRPA-201ENST00000243563 EPB41L2O43491 1005 aaKnown RBP23.97■■□□□ 1.43
SNRPA-201ENST00000243563 NBPF12Q5TAG4 269 aaPredicted RBP23.97■■□□□ 1.43
SNRPA-201ENST00000243563 USP48Q86UV5 1035 aa23.97■■□□□ 1.43
SNRPA-201ENST00000243563 C22orf23Q9BZE7 217 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms