RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TBC1D10CQ8IV04 446 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 RABGGTAQ92696 567 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 NTRK3Q16288 839 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 SPECC1Q5M775 1068 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 MAN1B1Q9UKM7 699 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 AKAP2Q9Y2D5 859 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 NFE2L3Q9Y4A8 694 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 GLI3P10071 1580 aa17.79■□□□□ 0.44
DDX55-201ENST00000238146 TJP1Q07157 1748 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 CPLX2Q6PUV4 134 aaKnown RBP17.78■□□□□ 0.44
DDX55-201ENST00000238146 MICU3Q86XE3 530 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 TXLNBQ8N3L3 684 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 DHX58Q96C10 678 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 FUT8Q9BYC5 575 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 UBE2Q2LH0YL09 131 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 CCDC57Q2TAC2 916 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 ELOA2Q8IYF1 753 aaPredicted RBP17.78■□□□□ 0.44
DDX55-201ENST00000238146 KRI1Q8N9T8 703 aaKnown RBP17.78■□□□□ 0.44
DDX55-201ENST00000238146 DESI2Q9BSY9 194 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 KIF1AQ12756 1690 aa17.78■□□□□ 0.44
DDX55-201ENST00000238146 RANBP6O60518 1105 aaKnown RBP17.77■□□□□ 0.44
DDX55-201ENST00000238146 A1BGP04217 495 aa17.77■□□□□ 0.44
DDX55-201ENST00000238146 CDK11BP21127 795 aaKnown RBP17.77■□□□□ 0.44
DDX55-201ENST00000238146 TRERF1Q96PN7 1200 aa17.77■□□□□ 0.44
DDX55-201ENST00000238146 TRPM3Q9HCF6 1732 aaPredicted RBP17.77■□□□□ 0.44
DDX55-201ENST00000238146 IARSP41252 1262 aaKnown RBP17.77■□□□□ 0.44
DDX55-201ENST00000238146 STK11IPQ8N1F8 1099 aa17.77■□□□□ 0.44
DDX55-201ENST00000238146 ENOX1Q8TC92 643 aaKnown RBP17.77■□□□□ 0.44
DDX55-201ENST00000238146 FAM217BQ9NTX9 383 aaPredicted RBP17.77■□□□□ 0.44
DDX55-201ENST00000238146 CSB-PGBD3P0DP91 1061 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 TRIM29Q14134 588 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 KARSQ15046 597 aaKnown RBP17.76■□□□□ 0.43
DDX55-201ENST00000238146 POSTNQ15063 836 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 TRMT44Q8IYL2 757 aaKnown RBP17.76■□□□□ 0.43
DDX55-201ENST00000238146 GOLGA1Q92805 767 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 MED15Q96RN5 788 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 UBN2Q6ZU65 1347 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 ZNF827Q17R98 1081 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 NT5DC1Q5TFE4 455 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 MLKLQ8NB16 471 aa17.76■□□□□ 0.43
DDX55-201ENST00000238146 MRPL44Q9H9J2 332 aaKnown RBP17.76■□□□□ 0.43
DDX55-201ENST00000238146 B4E1Z4 1266 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 ZBTB43O43298 467 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 SARSP49591 514 aaKnown RBP17.75■□□□□ 0.43
DDX55-201ENST00000238146 GRIN1Q05586 938 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 RAD51AP2Q09MP3 1159 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 MTF1Q14872 753 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 IGDCC4Q8TDY8 1250 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 CCDC12Q8WUD4 166 aaPredicted RBP17.75■□□□□ 0.43
DDX55-201ENST00000238146 IRX2Q9BZI1 471 aaPredicted RBP17.75■□□□□ 0.43
DDX55-201ENST00000238146 HOOK1Q9UJC3 728 aaKnown RBP17.75■□□□□ 0.43
DDX55-201ENST00000238146 TXLNAP40222 546 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 MUM1L1Q5H9M0 696 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 CCDC85AQ96PX6 553 aaPredicted RBP17.75■□□□□ 0.43
DDX55-201ENST00000238146 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 SAMSN1Q9NSI8 373 aaKnown RBP17.75■□□□□ 0.43
DDX55-201ENST00000238146 LAMB4A4D0S4 1761 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 SLC20A2Q08357 652 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 GPS2Q13227 327 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 MORC3Q14149 939 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 LONRF2Q1L5Z9 754 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 RAI14Q9P0K7 980 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
DDX55-201ENST00000238146 CCDC151A5D8V7 595 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 GOLGA8AA7E2F4 631 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 POLR2DO15514 142 aaKnown RBP17.74■□□□□ 0.43
DDX55-201ENST00000238146 ADD2P35612 726 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 MCAMP43121 646 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 TOB1P50616 345 aaPredicted RBP17.74■□□□□ 0.43
DDX55-201ENST00000238146 NR1I3Q14994 352 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 NOSTRINQ8IVI9 506 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.74■□□□□ 0.437e-8■■□□□ 14.4
DDX55-201ENST00000238146 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 MAP3K15Q6ZN16 1313 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 JAKMIP3Q5VZ66 844 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
DDX55-201ENST00000238146 TMEM87BQ96K49 555 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
DDX55-201ENST00000238146 FBXO2Q9UK22 296 aaPredicted RBP17.74■□□□□ 0.43
DDX55-201ENST00000238146 BTBD18B2RXH4 712 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 APPP05067 770 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 PTPREP23469 700 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 GYS2P54840 703 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 SLC9C2Q5TAH2 1124 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 NFXL1Q6ZNB6 911 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 GRAMD1CQ8IYS0 662 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 SLC26A6Q9BXS9 759 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 TEX13AQ9BXU3 409 aaPredicted RBP17.73■□□□□ 0.43
DDX55-201ENST00000238146 DACH1Q9UI36 760 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 SOWAHDA6NJG2 315 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 CCDC175P0C221 793 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 ZSWIM4Q9H7M6 989 aa17.73■□□□□ 0.43
DDX55-201ENST00000238146 H3BQF6 201 aa17.72■□□□□ 0.43
DDX55-201ENST00000238146 MAP2K7O14733 419 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms