RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 TRIOBPQ9H2D6 2365 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 CIAO1O76071 339 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 COL4A1P02462 1669 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 PTPRCP08575 1304 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 CT47B1P0C2W7 299 aaPredicted RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 SMAD3P84022 425 aaKnown RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 SH3D19Q5HYK7 790 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 METTL24Q5JXM2 366 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 IL27Q8NEV9 243 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 ARAP2Q8WZ64 1704 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 SHISA4Q96DD7 197 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 NUDT12Q9BQG2 462 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 WDR18Q9BV38 432 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 AKAP2Q9Y2D5 859 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 POLR2AP24928 1970 aaKnown RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 MYH3P11055 1940 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 UTYO14607 1347 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 LDHBP07195 334 aaKnown RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 USP14P54578 494 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 AAK1Q2M2I8 961 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 LMBR1LQ6UX01 489 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 DEFB123Q8N688 67 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 TDRD3Q9H7E2 651 aaKnown RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 MTMR10Q9NXD2 777 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 TCP10L2B9ZVM9 353 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 IRF6O14896 467 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 PDE8BO95263 885 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 IRX3P78415 501 aaPredicted RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 RABL6Q3YEC7 729 aaPredicted RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 RTL5Q5HYW3 569 aaPredicted RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 PRAMEF18Q5VWM3 479 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 FAM84BQ96KN1 310 aaPredicted RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 PHAXQ9H814 394 aaKnown RBP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 FLT3LGP49771 235 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 NEUROD2Q15784 382 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRKD3-201ENST00000234179 SH3TC2Q8TF17 1288 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 APBA2Q99767 749 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 TRIM34Q9BYJ4 488 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 UNC93B1Q9H1C4 597 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 CEP126Q9P2H0 1117 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 CPA4Q9UI42 421 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 ATRNL1Q5VV63 1379 aa2.85□□□□□ -1.95
PRKD3-201ENST00000234179 SLC15A5A6NIM6 579 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 USP17L5A8MUK1 530 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 ASNSP08243 561 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 BCAMP50895 628 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 PRKCZQ05513 592 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 MVPQ14764 893 aaKnown RBP2.84□□□□□ -1.95
PRKD3-201ENST00000234179 C1orf53Q5VUE5 145 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 FOXP4Q8IVH2 680 aaPredicted RBP2.84□□□□□ -1.95
PRKD3-201ENST00000234179 DEFB118Q96PH6 123 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 C1QTNF1Q9BXJ1 281 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 SMC4Q9NTJ3 1288 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 GAKO14976 1311 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 F8W031 263 aaPredicted RBP2.84□□□□□ -1.95
PRKD3-201ENST00000234179 BAG3O95817 575 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 UQCRFS1P1P0C7P4 283 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 HOXA7P31268 230 aaPredicted RBP2.84□□□□□ -1.95
PRKD3-201ENST00000234179 IL15P40933 162 aaPredicted RBP2.84□□□□□ -1.95
PRKD3-201ENST00000234179 BEND3Q5T5X7 828 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 SHCBP1Q8NEM2 672 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 TANGO6Q9C0B7 1094 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.84□□□□□ -1.95
PRKD3-201ENST00000234179 PRDM6Q9NQX0 595 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 EYA2O00167 538 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 AKNAD1Q5T1N1 836 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 MAP3K21Q5TCX8 1036 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 DLK2Q6UY11 383 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 MB21D1Q8N884 522 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 GPRC5AQ8NFJ5 357 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 CCDC85AQ96PX6 553 aaPredicted RBP2.84□□□□□ -1.95
PRKD3-201ENST00000234179 TMEM39BQ9GZU3 492 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 SH2D4AQ9H788 454 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 RABGAP1Q9Y3P9 1069 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 IVNS1ABPQ9Y6Y0 642 aa2.84□□□□□ -1.95
PRKD3-201ENST00000234179 STRNO43815 780 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 HLA-DOAP06340 250 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 PTPRAP18433 802 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 FOXO4P98177 505 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 CHAF1AQ13111 956 aaPredicted RBP2.84□□□□□ -1.96
PRKD3-201ENST00000234179 TJAP1Q5JTD0 557 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 APOBEC3HQ6NTF7 200 aaKnown RBP2.84□□□□□ -1.96
PRKD3-201ENST00000234179 GADL1Q6ZQY3 521 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 TXNRD3Q86VQ6 643 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 DZIP1Q86YF9 867 aaKnown RBP2.84□□□□□ -1.96
PRKD3-201ENST00000234179 ZNF280CQ8ND82 737 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 CUL9Q8IWT3 2517 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 KBTBD13C9JR72 458 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 APAF1O14727 1248 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 HOXC6P09630 235 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 USP17L2Q6R6M4 530 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 C7orf61Q8IZ16 206 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 ABRAQ8N0Z2 381 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.84□□□□□ -1.96
PRKD3-201ENST00000234179 C8orf58Q8NAV2 365 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 C12orf42Q96LP6 360 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 KCNH6Q9H252 994 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 USP40Q9NVE5 1235 aa2.84□□□□□ -1.96
PRKD3-201ENST00000234179 AFG3L2Q9Y4W6 797 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms