RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ADALQ6DHV7 355 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 MIS18BP1Q6P0N0 1132 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 SMARCC2Q8TAQ2 1214 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 ATRIPQ8WXE1 791 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 PCDHA7Q9UN72 937 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 CD163L1Q9NR16 1453 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 AKAP17AQ02040 695 aaKnown RBP14.74□□□□□ -0.05
MSH2-201ENST00000233146 ACTR5Q9H9F9 607 aaPredicted RBP14.74□□□□□ -0.05
MSH2-201ENST00000233146 PES1O00541 588 aaKnown RBP14.74□□□□□ -0.05
MSH2-201ENST00000233146 FESP07332 822 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 PDIA5Q14554 519 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 C6orf89Q6UWU4 347 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 SLC35F6Q8N357 371 aa14.74□□□□□ -0.05
MSH2-201ENST00000233146 ZNF396Q96N95 335 aaPredicted RBP14.74□□□□□ -0.05
MSH2-201ENST00000233146 NAPGQ99747 312 aaPredicted RBP14.74□□□□□ -0.05
MSH2-201ENST00000233146 CHCHD3Q9NX63 227 aaKnown RBP14.74□□□□□ -0.05
MSH2-201ENST00000233146 DEPDC5O75140 1603 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 GOLGA6L7A0A1B0GV03 622 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 TARSL2A2RTX5 802 aaKnown RBP14.73□□□□□ -0.05
MSH2-201ENST00000233146 HMOX1P09601 288 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 RPS6KB1P23443 525 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 BZW1Q7L1Q6 419 aaKnown RBP14.73□□□□□ -0.05
MSH2-201ENST00000233146 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
MSH2-201ENST00000233146 LMTK2Q8IWU2 1503 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.73□□□□□ -0.052e-10■■□□□ 13.9
MSH2-201ENST00000233146 TULP4Q9NRJ4 1543 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 AHCYL1O43865 530 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 SMNDC1O75940 238 aaKnown RBP eCLIP14.73□□□□□ -0.05
MSH2-201ENST00000233146 PYGLP06737 847 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 AMPD2Q01433 879 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 ACCSLQ4AC99 568 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 BLOC1S2Q6QNY1 142 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 NFXL1Q6ZNB6 911 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 CCDC114Q96M63 670 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 TCEANC2Q96MN5 208 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 LMCD1Q9NZU5 365 aa14.73□□□□□ -0.05
MSH2-201ENST00000233146 MAGEA8P43361 318 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 IFFO1Q0D2I5 559 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 PDCLQ13371 301 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 NAA16Q6N069 864 aaPredicted RBP14.72□□□□□ -0.05
MSH2-201ENST00000233146 SLC4A10Q6U841 1118 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 GDAP1L1Q96MZ0 367 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 EPN3Q9H201 632 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 EPB41P11171 864 aaKnown RBP14.72□□□□□ -0.05
MSH2-201ENST00000233146 SPECC1LQ69YQ0 1117 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 RASSF8Q8NHQ8 419 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 EBF2Q9HAK2 575 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 ZFYVE9O95405 1425 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 FAM83GA6ND36 823 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 SOWAHDA6NJG2 315 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 H7C1W4 665 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 ZNF473Q8WTR7 871 aaKnown RBP14.72□□□□□ -0.05
MSH2-201ENST00000233146 TRPC6Q9Y210 931 aa14.72□□□□□ -0.05
MSH2-201ENST00000233146 F6X3S4 739 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 SLC27A2O14975 620 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 RAD9BQ6WBX8 426 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 RTEL1Q9NZ71 1219 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 CORO1CQ9ULV4 474 aaPredicted RBP14.71□□□□□ -0.05
MSH2-201ENST00000233146 ERICH2A1L162 156 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 MGRN1O60291 552 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 SSBP05455 408 aaKnown RBP eCLIP14.71□□□□□ -0.05
MSH2-201ENST00000233146 IFT88Q13099 833 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 NCAPH2Q6IBW4 605 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 MAP4K1Q92918 833 aa14.71□□□□□ -0.05
MSH2-201ENST00000233146 SLC4A2P04920 1241 aa14.71□□□□□ -0.06
MSH2-201ENST00000233146 CCNI2Q6ZMN8 369 aaPredicted RBP14.71□□□□□ -0.06
MSH2-201ENST00000233146 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.71□□□□□ -0.06
MSH2-201ENST00000233146 CWF19L1Q69YN2 538 aaKnown RBP14.7□□□□□ -0.06
MSH2-201ENST00000233146 CYB5RLQ6IPT4 315 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 RASGRP2Q7LDG7 609 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 MFN1Q8IWA4 741 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 NSMCE1Q8WV22 266 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 EZH1Q92800 747 aaPredicted RBP14.7□□□□□ -0.06
MSH2-201ENST00000233146 SPAG5Q96R06 1193 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 PANX2Q96RD6 677 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 PCDHGC5Q9Y5F6 944 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 ACSBG1Q96GR2 724 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 HAUS2Q9NVX0 235 aa14.7□□□□□ -0.06
MSH2-201ENST00000233146 OPA1O60313 960 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 LSP1P33241 339 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 PDE6BP35913 854 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 CCDC181Q5TID7 509 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 NCAPG2Q86XI2 1143 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 CCDC47Q96A33 483 aaKnown RBP14.69□□□□□ -0.06
MSH2-201ENST00000233146 OSBPL9Q96SU4 736 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 CDC5LQ99459 802 aaKnown RBP14.69□□□□□ -0.06
MSH2-201ENST00000233146 PSMD1Q99460 953 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 SLC30A9Q6PML9 568 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 TUBE1Q9UJT0 475 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 TBC1D2BQ9UPU7 963 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 XRCC4Q13426 336 aa14.69□□□□□ -0.06
MSH2-201ENST00000233146 ZCCHC11Q5TAX3 1644 aaKnown RBP14.69□□□□□ -0.06
MSH2-201ENST00000233146 IMPDH2P12268 514 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 LAMB3Q13751 1172 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 TTMPQ5BVD1 217 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 ILDR1Q86SU0 546 aaPredicted RBP14.68□□□□□ -0.06
MSH2-201ENST00000233146 TRIM58Q8NG06 486 aa14.68□□□□□ -0.06
MSH2-201ENST00000233146 AENQ8WTP8 325 aaKnown RBP14.68□□□□□ -0.06
MSH2-201ENST00000233146 NAA15Q9BXJ9 866 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms