RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 IGSF3O75054 1194 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 TBC1D8BQ0IIM8 1120 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 SH3BP5O60239 455 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 TOM1O60784 492 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 ERCC5P28715 1186 aaPredicted RBP12.93□□□□□ -0.34
LAMA4-201ENST00000230538 SMTNP53814 917 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 RASA3Q14644 834 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 ASIC2Q16515 512 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 CCDC117Q8IWD4 279 aaPredicted RBP12.93□□□□□ -0.34
LAMA4-201ENST00000230538 STIM2Q9P246 746 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 CCDC169A6NNP5 214 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 E7EVH7 732 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 POLD1P28340 1107 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 KIFC2Q96AC6 838 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 TMEM87BQ96K49 555 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 A2MP01023 1474 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 CYP26C1Q6V0L0 522 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 INTS8Q75QN2 995 aaKnown RBP12.92□□□□□ -0.34
LAMA4-201ENST00000230538 ARMT1Q9H993 441 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 SNX14Q9Y5W7 946 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 PPP1R21Q6ZMI0 780 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 NAPGQ99747 312 aaPredicted RBP12.92□□□□□ -0.34
LAMA4-201ENST00000230538 EVCP57679 992 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 TTC31Q49AM3 519 aaPredicted RBP12.92□□□□□ -0.34
LAMA4-201ENST00000230538 EYA1Q99502 592 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 FAM204AQ9H8W3 233 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 UBAP1LF5GYI3 381 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 ANO1Q5XXA6 986 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 CEP128Q6ZU80 1094 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 A0A1B0GUL7 405 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 HOXC9P31274 260 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 HAUS3Q68CZ6 603 aa12.92□□□□□ -0.34
LAMA4-201ENST00000230538 ITGA6P23229 1130 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
LAMA4-201ENST00000230538 SYNRGQ9UMZ2 1314 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 GMNNO75496 209 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 CRCPO75575 148 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 PUM3Q15397 648 aaKnown RBP12.91□□□□□ -0.34
LAMA4-201ENST00000230538 OGFRQ9NZT2 677 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 KCNH3Q9ULD8 1083 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 CIB2O75838 187 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
LAMA4-201ENST00000230538 SLC8A3P57103 927 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 TNNI3KQ59H18 835 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 CCT6BQ92526 530 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 UTP11Q9Y3A2 253 aaKnown RBP12.91□□□□□ -0.34
LAMA4-201ENST00000230538 FPGT-TNNI3KV9GXZ4 949 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 LIN9Q5TKA1 542 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 UFL1O94874 794 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 EIF6P56537 245 aaKnown RBP12.91□□□□□ -0.34
LAMA4-201ENST00000230538 STRN3Q13033 797 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 CCDC110Q8TBZ0 833 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 ARHGEF10LQ9HCE6 1279 aa12.91□□□□□ -0.34
LAMA4-201ENST00000230538 GNPATO15228 680 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 RNF34Q969K3 372 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 IFT74Q96LB3 600 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 NCOA5Q9HCD5 579 aaKnown RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 UTP14CQ5TAP6 766 aaKnown RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 C8orf74Q6P047 294 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 HIBADHP31937 336 aaKnown RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 CLUL1Q15846 466 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 GEN1Q17RS7 908 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 UBL4BQ8N7F7 174 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 EXOC7Q9UPT5 735 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 HPDP32754 393 aaPredicted RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 TRPC3Q13507 836 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 STMN2Q93045 179 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 POLR2DO15514 142 aaKnown RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 TXKP42681 527 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 CSGALNACT2Q8N6G5 542 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 PLBD2Q8NHP8 589 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 TMOD4Q9NZQ9 345 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
LAMA4-201ENST00000230538 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 ATP10BO94823 1461 aa12.9□□□□□ -0.34
LAMA4-201ENST00000230538 EYA2O00167 538 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 TIMM10P62072 90 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 PAK1Q13153 545 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 DDX21Q9NR30 783 aaKnown RBP eCLIP12.89□□□□□ -0.35
LAMA4-201ENST00000230538 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
LAMA4-201ENST00000230538 RNASE9P60153 205 aaKnown RBP12.89□□□□□ -0.35
LAMA4-201ENST00000230538 AFAP1L1Q8TED9 768 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 CLSTN2Q9H4D0 955 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-201ENST00000230538 FYB2Q5VWT5 728 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 NCAPH2Q6IBW4 605 aa12.89□□□□□ -0.35
LAMA4-201ENST00000230538 C17orf53Q8N3J3 647 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-201ENST00000230538 CNBD1Q8NA66 436 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms