RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 SERPINB2P05120 415 aa16.83■□□□□ 0.29
PRKAB1-201ENST00000229328 POLR3DP05423 398 aaPredicted RBP16.83■□□□□ 0.29
PRKAB1-201ENST00000229328 ANAPC4Q9UJX5 808 aa16.83■□□□□ 0.29
PRKAB1-201ENST00000229328 SLC12A7Q9Y666 1083 aa16.83■□□□□ 0.29
PRKAB1-201ENST00000229328 CCDC69A6NI79 296 aa16.83■□□□□ 0.28
PRKAB1-201ENST00000229328 NUP62CLQ9H1M0 184 aa16.83■□□□□ 0.28
PRKAB1-201ENST00000229328 AATFQ9NY61 560 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRKAB1-201ENST00000229328 BAZ2AQ9UIF9 1905 aaKnown RBP16.83■□□□□ 0.28
PRKAB1-201ENST00000229328 ZNF396Q96N95 335 aaPredicted RBP16.83■□□□□ 0.28
PRKAB1-201ENST00000229328 RNF41Q9H4P4 317 aaPredicted RBP16.83■□□□□ 0.28
PRKAB1-201ENST00000229328 ALG1Q9BT22 464 aa16.82■□□□□ 0.28
PRKAB1-201ENST00000229328 BRIP1Q9BX63 1249 aa16.82■□□□□ 0.28
PRKAB1-201ENST00000229328 DDR1Q08345 913 aa16.82■□□□□ 0.28
PRKAB1-201ENST00000229328 WTAPQ15007 396 aa16.82■□□□□ 0.28
PRKAB1-201ENST00000229328 CTR9Q6PD62 1173 aa16.82■□□□□ 0.28
PRKAB1-201ENST00000229328 RPGRQ92834 1020 aaKnown RBP16.82■□□□□ 0.28
PRKAB1-201ENST00000229328 GPSM2P81274 684 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 KIF23Q02241 960 aaPredicted RBP16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 CRY2Q49AN0 593 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 CKAP2LQ8IYA6 745 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 LEMD3Q9Y2U8 911 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 XDHP47989 1333 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 PRDM1O75626 825 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 CDKL5O76039 1030 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 TXNRD1Q16881 649 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 ATL3Q6DD88 541 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 GOLPH3LQ9H4A5 285 aa16.81■□□□□ 0.28
PRKAB1-201ENST00000229328 USP17L12C9JPN9 530 aa16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 USP17L21D6R901 530 aa16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 IARSP41252 1262 aaKnown RBP16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 GRIK5Q16478 980 aa16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 MAP3K11Q16584 847 aa16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 CPLX2Q6PUV4 134 aaKnown RBP16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 TNMDQ9H2S6 317 aa16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 CLSTN2Q9H4D0 955 aa16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 DDX19AQ9NUU7 478 aaKnown RBP16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 CLIC4Q9Y696 253 aa16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 ST5P78524 1137 aa16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
PRKAB1-201ENST00000229328 MYSM1Q5VVJ2 828 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 KRT40Q6A162 431 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 CCAR1Q8IX12 1150 aaKnown RBP16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 TDRD7Q8NHU6 1098 aaKnown RBP16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 ESR2Q92731 530 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 SLC26A6Q9BXS9 759 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 RTEL1Q9NZ71 1219 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 TNKSO95271 1327 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 ECM29Q5VYK3 1845 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 ERICH2A1L162 156 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 ESPNB1AK53 854 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 POLRMTO00411 1230 aaKnown RBP16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 SEC23AQ15436 765 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 SYNE3Q6ZMZ3 975 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 UBAC1Q9BSL1 405 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 DUOX1Q9NRD9 1551 aa16.79■□□□□ 0.28
PRKAB1-201ENST00000229328 NID2Q14112 1375 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 GUCY1A2P33402 732 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 ME1P48163 572 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 BRAPQ7Z569 592 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 PKNOX2Q96KN3 472 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 CYP2D6P10635 497 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 RBM43Q6ZSC3 357 aaKnown RBP16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 DZIP1Q86YF9 867 aaKnown RBP16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 LINC00301Q8NCQ3 95 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 MTA3Q9BTC8 594 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 CRNKL1Q9BZJ0 848 aaKnown RBP16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 PCDHA7Q9UN72 937 aa16.78■□□□□ 0.28
PRKAB1-201ENST00000229328 FMNL1O95466 1100 aaPredicted RBP16.77■□□□□ 0.28
PRKAB1-201ENST00000229328 CCDC192P0DO97 292 aa16.77■□□□□ 0.28
PRKAB1-201ENST00000229328 IFNAR1P17181 557 aa16.77■□□□□ 0.28
PRKAB1-201ENST00000229328 SSRP1Q08945 709 aaKnown RBP16.77■□□□□ 0.28
PRKAB1-201ENST00000229328 RTN1Q16799 776 aa16.77■□□□□ 0.28
PRKAB1-201ENST00000229328 ENAHQ8N8S7 591 aaPredicted RBP16.77■□□□□ 0.28
PRKAB1-201ENST00000229328 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.28
PRKAB1-201ENST00000229328 RBM17Q96I25 401 aaKnown RBP16.77■□□□□ 0.28
PRKAB1-201ENST00000229328 UFL1O94874 794 aa16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 FGRP09769 529 aa16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 TYRO3Q06418 890 aa16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 ZNF827Q17R98 1081 aa16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 UVSSAQ2YD98 709 aa16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 KLHL34Q8N239 644 aa16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 USP25Q9UHP3 1055 aa16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 MRVI1Q9Y6F6 885 aa16.77■□□□□ 0.27
PRKAB1-201ENST00000229328 MAST2Q6P0Q8 1798 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 MYH2Q9UKX2 1941 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 ZBTB22O15209 634 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 SLC4A8Q2Y0W8 1093 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 NBPF11Q86T75 865 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 TMTC2Q8N394 836 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 ZSCAN10Q96SZ4 725 aaPredicted RBP16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 LDHBP07195 334 aaKnown RBP16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 DIXDC1Q155Q3 683 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 SPTY2D1Q68D10 685 aaPredicted RBP16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 ZNF804AQ7Z570 1209 aa16.76■□□□□ 0.27
PRKAB1-201ENST00000229328 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms