RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 RPAP1Q9BWH6 1393 aaPredicted RBP15.4■□□□□ 0.06
LSM5-201ENST00000223084 DDTLA6NHG4 134 aaPredicted RBP15.4■□□□□ 0.06
LSM5-201ENST00000223084 ENTPD3O75355 529 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 BAG3O95817 575 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 SLURP2P0DP57 97 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 PDE6AP16499 860 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 MAP2K2P36507 400 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 PPP4CP60510 307 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
LSM5-201ENST00000223084 NOGQ13253 232 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 SLC9C2Q5TAH2 1124 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 B4GALNT3Q6L9W6 998 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 ZSCAN29Q8IWY8 852 aaPredicted RBP15.4■□□□□ 0.06
LSM5-201ENST00000223084 GPATCH3Q96I76 525 aa15.4■□□□□ 0.06
LSM5-201ENST00000223084 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
LSM5-201ENST00000223084 OTOFQ9HC10 1997 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 IGSF3O75054 1194 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 CHGBP05060 677 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 SMC5Q8IY18 1101 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 TGFBRAP1Q8WUH2 860 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 SLC10A4Q96EP9 437 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 ZNF532Q9HCE3 1301 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 THSD7BQ9C0I4 1608 aa15.39■□□□□ 0.05
LSM5-201ENST00000223084 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
LSM5-201ENST00000223084 PLCG2P16885 1265 aa15.38■□□□□ 0.05
LSM5-201ENST00000223084 MAP3K9P80192 1104 aa15.38■□□□□ 0.05
LSM5-201ENST00000223084 MAP2K1Q02750 393 aaPredicted RBP15.38■□□□□ 0.05
LSM5-201ENST00000223084 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.38■□□□□ 0.05
LSM5-201ENST00000223084 ANKRD13AQ8IZ07 590 aa15.38■□□□□ 0.05
LSM5-201ENST00000223084 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.38■□□□□ 0.052e-7■□□□□ 9.7
LSM5-201ENST00000223084 CSRNP1Q96S65 589 aa15.38■□□□□ 0.05
LSM5-201ENST00000223084 LNPKQ9C0E8 428 aa15.38■□□□□ 0.05
LSM5-201ENST00000223084 ELP3Q9H9T3 547 aa15.38■□□□□ 0.05
LSM5-201ENST00000223084 CDK5RAP2Q96SN8 1893 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 TCRBV5S4A2TA0A5A2 114 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 FOXN1O15353 648 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 MX1P20591 662 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 DCAF15Q66K64 600 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 MAPKAPK5Q8IW41 473 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 PI4K2BQ8TCG2 481 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 HOOK2Q96ED9 719 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 WRNIP1Q96S55 665 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 ZNF341Q9BYN7 854 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 OSBPL5Q9H0X9 879 aaPredicted RBP15.37■□□□□ 0.05
LSM5-201ENST00000223084 TTC41PQ6P2S7 1318 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 SALL3Q9BXA9 1300 aa15.37■□□□□ 0.05
LSM5-201ENST00000223084 MAGEB6P1A0A0J9YX57 407 aa15.36■□□□□ 0.05
LSM5-201ENST00000223084 INPP5BP32019 993 aa15.36■□□□□ 0.05
LSM5-201ENST00000223084 ADD2P35612 726 aa15.36■□□□□ 0.05
LSM5-201ENST00000223084 GJA5P36382 358 aa15.36■□□□□ 0.05
LSM5-201ENST00000223084 VGLL4Q14135 290 aa15.36■□□□□ 0.05
LSM5-201ENST00000223084 SPRYD7Q5W111 196 aa15.36■□□□□ 0.05
LSM5-201ENST00000223084 ZKSCAN4Q969J2 545 aaPredicted RBP15.36■□□□□ 0.05
LSM5-201ENST00000223084 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
LSM5-201ENST00000223084 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
LSM5-201ENST00000223084 ATRNL1Q5VV63 1379 aa15.36■□□□□ 0.05
LSM5-201ENST00000223084 MYH7P12883 1935 aa15.35■□□□□ 0.05
LSM5-201ENST00000223084 FAM196BA6NMK8 535 aa15.35■□□□□ 0.05
LSM5-201ENST00000223084 AIDAQ96BJ3 306 aa15.35■□□□□ 0.05
LSM5-201ENST00000223084 RIOK1Q9BRS2 568 aaKnown RBP15.35■□□□□ 0.05
LSM5-201ENST00000223084 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.35■□□□□ 0.05
LSM5-201ENST00000223084 SAP30BPQ9UHR5 308 aaKnown RBP15.35■□□□□ 0.05
LSM5-201ENST00000223084 TSKSQ9UJT2 592 aa15.35■□□□□ 0.05
LSM5-201ENST00000223084 CSADQ9Y600 493 aa15.35■□□□□ 0.05
LSM5-201ENST00000223084 FLT1P17948 1338 aa15.35■□□□□ 0.05
LSM5-201ENST00000223084 FOCADQ5VW36 1801 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 UNCXA6NJT0 531 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 ERC2O15083 957 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 GLRX3O76003 335 aaKnown RBP15.34■□□□□ 0.05
LSM5-201ENST00000223084 USP5P45974 858 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 PDE1AP54750 535 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 NUCB1Q02818 461 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 SLC4A8Q2Y0W8 1093 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 TMED8Q6PL24 325 aaPredicted RBP15.34■□□□□ 0.05
LSM5-201ENST00000223084 CHD1LQ86WJ1 897 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 OPTNQ96CV9 577 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 ZNF112Q9UJU3 913 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 PALD1Q9ULE6 856 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 SNCAIPQ9Y6H5 919 aa15.34■□□□□ 0.05
LSM5-201ENST00000223084 PHF20L1A8MW92 1017 aa15.33■□□□□ 0.04
LSM5-201ENST00000223084 LCORLQ8N3X6 602 aa15.33■□□□□ 0.04
LSM5-201ENST00000223084 KBTBD3Q8NAB2 608 aa15.33■□□□□ 0.04
LSM5-201ENST00000223084 BEGAINQ9BUH8 593 aa15.33■□□□□ 0.04
LSM5-201ENST00000223084 ARMT1Q9H993 441 aa15.33■□□□□ 0.04
LSM5-201ENST00000223084 STAP2Q9UGK3 403 aa15.33■□□□□ 0.04
LSM5-201ENST00000223084 MBD4O95243 580 aa15.32■□□□□ 0.04
LSM5-201ENST00000223084 MAP3K10Q02779 954 aa15.32■□□□□ 0.04
LSM5-201ENST00000223084 UBE3CQ15386 1083 aa15.32■□□□□ 0.04
LSM5-201ENST00000223084 ZSCAN25Q6NSZ9 544 aa15.32■□□□□ 0.04
LSM5-201ENST00000223084 CERS3Q8IU89 383 aa15.32■□□□□ 0.04
LSM5-201ENST00000223084 OTUD5Q96G74 571 aa15.32■□□□□ 0.04
LSM5-201ENST00000223084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
LSM5-201ENST00000223084 MYH1P12882 1939 aa15.32■□□□□ 0.04
LSM5-201ENST00000223084 COL2A1P02458 1487 aaPredicted RBP15.32■□□□□ 0.04
LSM5-201ENST00000223084 SIPA1L1O43166 1804 aa15.31■□□□□ 0.04
LSM5-201ENST00000223084 PRKAB2O43741 272 aa15.31■□□□□ 0.04
LSM5-201ENST00000223084 ZBTB48P10074 688 aaPredicted RBP15.31■□□□□ 0.04
LSM5-201ENST00000223084 HSPA8P11142 646 aaKnown RBP15.31■□□□□ 0.04
LSM5-201ENST00000223084 CTCFP49711 727 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms